Analysis of interatomic Contacts of Structural Units in PDB entry:
4C5Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4C5Q entry

There are 8 chains in PDB entry 4C5Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 306SER 361
B
 HIS 306ILE 360
C
 ASP 309ASN 357
D
 TYR 307ASN 357
E
 HIS 306SER 361
F
 HIS 306ILE 360
G
 LEU 311ASN 357
H
 TYR 307ASN 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4C5Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
308 341Right-handed alpha
Helix 2
2
A
341 358Right-handed alpha
Helix 3
3
B
308 341Right-handed alpha
Helix 4
4
B
341 358Right-handed alpha
Helix 5
5
C
309 341Right-handed alpha
Helix 6
6
C
341 357Right-handed alpha
Helix 7
7
D
308 341Right-handed alpha
Helix 8
8
D
341 357Right-handed alpha
Helix 9
9
E
308 341Right-handed alpha
Helix 10
10
E
341 358Right-handed alpha
Helix 11
11
F
308 341Right-handed alpha
Helix 12
12
F
341 358Right-handed alpha
Helix 13
13
G
311 341Right-handed alpha
Helix 14
14
G
341 357Right-handed alpha
Helix 15
15
H
308 340Right-handed alpha
Helix 16
16
H
341 357Right-handed alpha
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There are no sheets in PDB entry 4C5Q
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il