Analysis of interatomic Contacts of Structural Units in PDB entry:
4C60

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4C60 entry

There are 4 chains in PDB entry 4C60 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 45	LEU 480
B	ALA 47	LEU 480
C	ASP 45	LEU 480
D	ASP 45	ILE 76

There are136 helices in PDB entry 4C60. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	84	86	Right-handed 310
Helix 2	2	A	87	94	Right-handed alpha
Helix 3	3	A	124	130	Right-handed alpha
Helix 4	4	A	131	149	Right-handed alpha
Helix 5	5	A	160	170	Right-handed alpha
Helix 6	6	A	198	207	Right-handed alpha
Helix 7	7	A	226	241	Right-handed alpha
Helix 8	8	A	266	280	Right-handed alpha
Helix 9	9	A	290	301	Right-handed alpha
Helix 10	10	A	312	323	Right-handed alpha
Helix 11	11	A	329	340	Right-handed alpha
Helix 12	12	A	345	370	Right-handed alpha
Helix 13	13	A	386	395	Right-handed alpha
Helix 14	14	A	399	408	Right-handed alpha
Helix 15	15	A	410	419	Right-handed 310
Helix 16	16	A	443	449	Right-handed 310
Helix 17	17	A	449	451	Right-handed 310
Helix 18	18	B	84	86	Right-handed 310
Helix 19	19	B	87	94	Right-handed alpha
Helix 20	20	B	124	130	Right-handed alpha
Helix 21	21	B	131	149	Right-handed alpha
Helix 22	22	B	160	170	Right-handed alpha
Helix 23	23	B	198	207	Right-handed alpha
Helix 24	24	B	226	241	Right-handed alpha
Helix 25	25	B	266	280	Right-handed alpha
Helix 26	26	B	290	301	Right-handed alpha
Helix 27	27	B	312	323	Right-handed alpha
Helix 28	28	B	329	340	Right-handed alpha
Helix 29	29	B	345	370	Right-handed alpha
Helix 30	30	B	385	395	Right-handed alpha
Helix 31	31	B	399	408	Right-handed alpha
Helix 32	32	B	410	419	Right-handed 310
Helix 33	33	B	443	449	Right-handed 310
Helix 34	34	B	449	451	Right-handed 310
Helix 35	35	C	84	86	Right-handed 310
Helix 36	36	C	87	94	Right-handed alpha
Helix 37	37	C	124	130	Right-handed alpha
Helix 38	38	C	131	149	Right-handed alpha
Helix 39	39	C	160	170	Right-handed alpha
Helix 40	40	C	198	207	Right-handed alpha
Helix 41	41	C	226	241	Right-handed alpha
Helix 42	42	C	266	280	Right-handed alpha
Helix 43	43	C	290	301	Right-handed alpha
Helix 44	44	C	312	323	Right-handed alpha
Helix 45	45	C	329	340	Right-handed alpha
Helix 46	46	C	345	370	Right-handed alpha
Helix 47	47	C	385	395	Right-handed alpha
Helix 48	48	C	399	408	Right-handed alpha
Helix 49	49	C	410	419	Right-handed 310
Helix 50	50	C	443	449	Right-handed 310
Helix 51	51	C	449	451	Right-handed 310
Helix 52	52	D	84	86	Right-handed 310
Helix 53	53	D	87	94	Right-handed alpha
Helix 54	54	D	124	130	Right-handed alpha
Helix 55	55	D	131	149	Right-handed alpha
Helix 56	56	D	160	170	Right-handed alpha
Helix 57	57	D	198	207	Right-handed alpha
Helix 58	58	D	226	241	Right-handed alpha
Helix 59	59	D	266	280	Right-handed alpha
Helix 60	60	D	290	301	Right-handed alpha
Helix 61	61	D	312	323	Right-handed alpha
Helix 62	62	D	329	340	Right-handed alpha
Helix 63	63	D	345	370	Right-handed alpha
Helix 64	64	D	385	395	Right-handed alpha
Helix 65	65	D	399	408	Right-handed alpha
Helix 66	66	D	410	419	Right-handed 310
Helix 67	67	D	443	449	Right-handed 310
Helix 68	68	D	449	451	Right-handed 310
Helix 69	69	E	84	86	Right-handed 310
Helix 70	70	E	87	94	Right-handed alpha
Helix 71	71	E	124	130	Right-handed alpha
Helix 72	72	E	131	149	Right-handed alpha
Helix 73	73	E	160	170	Right-handed alpha
Helix 74	74	E	198	207	Right-handed alpha
Helix 75	75	E	226	241	Right-handed alpha
Helix 76	76	E	266	280	Right-handed alpha
Helix 77	77	E	290	301	Right-handed alpha
Helix 78	78	E	312	323	Right-handed alpha
Helix 79	79	E	329	340	Right-handed alpha
Helix 80	80	E	345	370	Right-handed alpha
Helix 81	81	E	385	395	Right-handed alpha
Helix 82	82	E	399	408	Right-handed alpha
Helix 83	83	E	410	419	Right-handed 310
Helix 84	84	E	443	449	Right-handed 310
Helix 85	85	E	449	451	Right-handed 310
Helix 86	86	F	84	86	Right-handed 310
Helix 87	87	F	87	94	Right-handed alpha
Helix 88	88	F	124	130	Right-handed alpha
Helix 89	89	F	131	149	Right-handed alpha
Helix 90	90	F	160	170	Right-handed alpha
Helix 91	91	F	198	207	Right-handed alpha
Helix 92	92	F	226	241	Right-handed alpha
Helix 93	93	F	266	280	Right-handed alpha
Helix 94	94	F	290	301	Right-handed alpha
Helix 95	95	F	312	323	Right-handed alpha
Helix 96	96	F	329	340	Right-handed alpha
Helix 97	97	F	345	370	Right-handed alpha
Helix 98	98	F	385	395	Right-handed alpha
Helix 99	99	F	399	408	Right-handed alpha
Helix 100	100	F	410	419	Right-handed 310
Helix 101	101	F	443	449	Right-handed 310
Helix 102	102	F	449	451	Right-handed 310
Helix 103	103	G	84	86	Right-handed 310
Helix 104	104	G	87	94	Right-handed alpha
Helix 105	105	G	124	130	Right-handed alpha
Helix 106	106	G	131	149	Right-handed alpha
Helix 107	107	G	160	170	Right-handed alpha
Helix 108	108	G	198	207	Right-handed alpha
Helix 109	109	G	226	241	Right-handed alpha
Helix 110	110	G	266	280	Right-handed alpha
Helix 111	111	G	290	301	Right-handed alpha
Helix 112	112	G	312	323	Right-handed alpha
Helix 113	113	G	329	340	Right-handed alpha
Helix 114	114	G	345	370	Right-handed alpha
Helix 115	115	G	385	395	Right-handed alpha
Helix 116	116	G	399	408	Right-handed alpha
Helix 117	117	G	410	419	Right-handed 310
Helix 118	118	G	443	449	Right-handed 310
Helix 119	119	G	449	451	Right-handed 310
Helix 120	120	H	84	86	Right-handed 310
Helix 121	121	H	87	94	Right-handed alpha
Helix 122	122	H	124	130	Right-handed alpha
Helix 123	123	H	131	149	Right-handed alpha
Helix 124	124	H	160	170	Right-handed alpha
Helix 125	125	H	198	207	Right-handed alpha
Helix 126	126	H	226	240	Right-handed alpha
Helix 127	127	H	266	280	Right-handed alpha
Helix 128	128	H	290	301	Right-handed alpha
Helix 129	129	H	312	323	Right-handed alpha
Helix 130	130	H	329	340	Right-handed alpha
Helix 131	131	H	345	370	Right-handed alpha
Helix 132	132	H	385	395	Right-handed alpha
Helix 133	133	H	399	408	Right-handed alpha
Helix 134	134	H	410	419	Right-handed 310
Helix 135	135	H	443	449	Right-handed 310
Helix 136	136	H	449	451	Right-handed 310

There are 32 sheets in PDB entry 4C60. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD, CA, CB, CC, CD, A, DB, C, DD, EA, EB, EC, ED, FA, FB, FC, FD, GA, GB, GC, GD, HA, HB, HC, HD,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	82	first strand
Strand 2	A	65	73	anti-parallel
Strand 3	A	49	57	anti-parallel
Strand 4	A	96	105	parallel
Strand 5	A	433	436	anti-parallel
Strand 6	A	453	458	anti-parallel
Strand 7	A	461	464	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	112	first strand
Strand 2	A	151	156	parallel
Strand 3	A	177	180	parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	186	first strand
Strand 2	A	221	223	parallel

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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	248	first strand
Strand 2	A	284	288	parallel
Strand 3	A	304	307	parallel
Strand 4	A	325	327	parallel
Strand 5	A	373	374	parallel

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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	82	first strand
Strand 2	B	65	73	anti-parallel
Strand 3	B	49	57	anti-parallel
Strand 4	B	96	105	parallel
Strand 5	B	433	436	anti-parallel
Strand 6	B	453	458	anti-parallel
Strand 7	B	461	464	anti-parallel

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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	112	first strand
Strand 2	B	151	156	parallel
Strand 3	B	177	180	parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	184	186	first strand
Strand 2	B	221	223	parallel

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There are 5 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	245	248	first strand
Strand 2	B	284	288	parallel
Strand 3	B	304	307	parallel
Strand 4	B	325	327	parallel
Strand 5	B	373	374	parallel

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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	82	first strand
Strand 2	C	65	73	anti-parallel
Strand 3	C	49	57	anti-parallel
Strand 4	C	96	105	parallel
Strand 5	C	433	436	anti-parallel
Strand 6	C	453	458	anti-parallel
Strand 7	C	461	464	anti-parallel

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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	112	first strand
Strand 2	C	151	156	parallel
Strand 3	C	177	180	parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	186	first strand
Strand 2	C	221	223	parallel

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There are 5 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	245	248	first strand
Strand 2	C	284	288	parallel
Strand 3	C	304	307	parallel
Strand 4	C	325	327	parallel
Strand 5	C	373	374	parallel

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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	82	first strand
Strand 2	D	65	73	anti-parallel
Strand 3	D	49	57	anti-parallel
Strand 4	D	96	105	parallel
Strand 5	D	433	436	anti-parallel
Strand 6	D	453	458	anti-parallel
Strand 7	D	461	464	anti-parallel

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There are 3 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	112	first strand
Strand 2	D	151	156	parallel
Strand 3	D	177	180	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	184	186	first strand
Strand 2	D	221	223	parallel

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There are 5 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	245	248	first strand
Strand 2	D	284	288	parallel
Strand 3	D	304	307	parallel
Strand 4	D	325	327	parallel
Strand 5	D	373	374	parallel

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There are 7 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	82	first strand
Strand 2	E	65	73	anti-parallel
Strand 3	E	49	57	anti-parallel
Strand 4	E	96	105	parallel
Strand 5	E	433	436	anti-parallel
Strand 6	E	453	458	anti-parallel
Strand 7	E	461	464	anti-parallel

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There are 3 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	107	112	first strand
Strand 2	E	151	156	parallel
Strand 3	E	177	180	parallel

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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	184	186	first strand
Strand 2	E	221	223	parallel

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There are 5 strands in ED sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	245	248	first strand
Strand 2	E	284	288	parallel
Strand 3	E	304	307	parallel
Strand 4	E	325	327	parallel
Strand 5	E	373	374	parallel

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There are 7 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	76	82	first strand
Strand 2	F	65	73	anti-parallel
Strand 3	F	49	57	anti-parallel
Strand 4	F	96	105	parallel
Strand 5	F	433	436	anti-parallel
Strand 6	F	453	458	anti-parallel
Strand 7	F	461	464	anti-parallel

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There are 3 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	107	112	first strand
Strand 2	F	151	156	parallel
Strand 3	F	177	180	parallel

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There are 2 strands in FC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	184	186	first strand
Strand 2	F	221	223	parallel

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There are 5 strands in FD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	245	248	first strand
Strand 2	F	284	288	parallel
Strand 3	F	304	307	parallel
Strand 4	F	325	327	parallel
Strand 5	F	373	374	parallel

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There are 7 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	76	82	first strand
Strand 2	G	65	73	anti-parallel
Strand 3	G	49	57	anti-parallel
Strand 4	G	96	105	parallel
Strand 5	G	433	436	anti-parallel
Strand 6	G	453	458	anti-parallel
Strand 7	G	461	464	anti-parallel

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There are 3 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	107	112	first strand
Strand 2	G	151	156	parallel
Strand 3	G	177	180	parallel

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There are 2 strands in GC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	184	186	first strand
Strand 2	G	221	223	parallel

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There are 5 strands in GD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	245	248	first strand
Strand 2	G	284	288	parallel
Strand 3	G	304	307	parallel
Strand 4	G	325	327	parallel
Strand 5	G	373	374	parallel

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There are 7 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	76	82	first strand
Strand 2	H	65	73	anti-parallel
Strand 3	H	49	57	anti-parallel
Strand 4	H	96	105	parallel
Strand 5	H	433	436	anti-parallel
Strand 6	H	453	458	anti-parallel
Strand 7	H	461	464	anti-parallel

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There are 3 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	107	112	first strand
Strand 2	H	151	156	parallel
Strand 3	H	177	180	parallel

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There are 2 strands in HC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	184	186	first strand
Strand 2	H	221	223	parallel

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There are 5 strands in HD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	245	248	first strand
Strand 2	H	284	288	parallel
Strand 3	H	304	307	parallel
Strand 4	H	325	327	parallel
Strand 5	H	373	374	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4C60

Analysis of interatomic Contacts of Structural Units in PDB entry:
4C60