Analysis of interatomic Contacts of Structural Units in PDB entry:
4C8P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4C8P entry

There is 1 chain in PDB entry 4C8P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 54HIS 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 4C8P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
99 104Right-handed 310
Helix 2
2
A
135 146Right-handed alpha
Helix 3
3
A
160 166Right-handed alpha
Helix 4
4
A
181 195Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 4C8P.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 65first strand
Strand 2
A
71 82anti-parallel
Strand 3
A
177 180anti-parallel
Strand 4
A
148 154parallel
Strand 5
A
117 122parallel
Strand 6
A
91 97parallel
Strand 7
A
199 203anti-parallel
Strand 8
A
55 65anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il