Analysis of interatomic Contacts of Structural Units in PDB entry:
4C8W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4C8W entry

There are 2 chains in PDB entry 4C8W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
I
 ILE 39VAL 142
J
 CYS 40ASP 143
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 4C8W

There are 9 sheets in PDB entry 4C8W. Click on sheet of interest to get list of strands forming it: IA, IB, IC, ID, JA, JB, JC, JD, JE,

There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
43 47first strand
Strand 2
I
51 55anti-parallel
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There are 4 strands in IB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
70 75first strand
Strand 2
I
60 65anti-parallel
Strand 3
I
91 95parallel
Strand 4
I
82 86anti-parallel
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There are 2 strands in IC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
101 106first strand
Strand 2
I
109 113anti-parallel
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There are 2 strands in ID sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
118 120first strand
Strand 2
I
123 125anti-parallel
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There are 2 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
46 47first strand
Strand 2
J
51 52anti-parallel
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There are 4 strands in JB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
69 75first strand
Strand 2
J
60 66anti-parallel
Strand 3
J
91 95parallel
Strand 4
J
82 86anti-parallel
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There are 2 strands in JC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
101 106first strand
Strand 2
J
109 113anti-parallel
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There are 2 strands in JD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
118 120first strand
Strand 2
J
123 125anti-parallel
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There are 2 strands in JE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
133 134first strand
Strand 2
J
141 142anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il