Analysis of interatomic Contacts of Structural Units in PDB entry:
4C9J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4C9J entry

There are 2 chains in PDB entry 4C9J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 10PHE 306
B
 PHE 12LYS 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4C9J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 30Right-handed alpha
Helix 2
2
A
30 42Right-handed alpha
Helix 3
3
A
42 49Right-handed alpha
Helix 4
4
A
58 70Right-handed alpha
Helix 5
5
A
72 77Right-handed 310
Helix 6
6
A
78 85Right-handed alpha
Helix 7
7
A
85 105Right-handed alpha
Helix 8
8
A
111 147Right-handed alpha
Helix 9
9
A
161 173Right-handed alpha
Helix 10
10
A
174 179Right-handed alpha
Helix 11
11
A
181 203Right-handed alpha
Helix 12
12
A
221 234Right-handed alpha
Helix 13
13
A
234 248Right-handed alpha
Helix 14
14
A
256 269Right-handed alpha
Helix 15
15
A
270 275Right-handed 310
Helix 16
16
A
276 302Right-handed alpha
Helix 17
17
B
12 30Right-handed alpha
Helix 18
18
B
30 42Right-handed alpha
Helix 19
19
B
42 49Right-handed alpha
Helix 20
20
B
58 70Right-handed alpha
Helix 21
21
B
72 77Right-handed 310
Helix 22
22
B
78 85Right-handed alpha
Helix 23
23
B
85 104Right-handed alpha
Helix 24
24
B
115 147Right-handed alpha
Helix 25
25
B
161 173Right-handed alpha
Helix 26
26
B
174 179Right-handed alpha
Helix 27
27
B
181 203Right-handed alpha
Helix 28
28
B
221 234Right-handed alpha
Helix 29
29
B
234 247Right-handed alpha
Helix 30
30
B
256 269Right-handed alpha
Helix 31
31
B
270 275Right-handed 310
Helix 32
32
B
276 302Right-handed alpha
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There are no sheets in PDB entry 4C9J
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il