Analysis of interatomic Contacts of Structural Units in PDB entry:
4CC7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CC7 entry

There are 14 chains in PDB entry 4CC7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1516THR 1574
B
 PRO 2GLY 12
C
 ASN 1515THR 1577
D
 PRO 1GLY 12
E
 ASN 1515TYR 1576
F
 PRO 1GLY 12
G
 GLN 1516TYR 1576
H
 PRO 1GLY 12
I
 ASN 1515GLU 1575
J
 PRO 1GLY 12
K
 ASN 1515GLU 1575
L
 PRO 1GLY 12
M
 GLN 1516GLU 1575
N
 PRO 1GLY 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 4CC7

There are 7 sheets in PDB entry 4CC7. Click on sheet of interest to get list of strands forming it: AA, CA, EA, GA, IA, KA, MA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1562 1567first strand
Strand 2
A
1554 1559anti-parallel
Strand 3
A
1539 1544anti-parallel
Strand 4
A
1517 1520anti-parallel
Strand 5
A
1571 1572anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1562 1567first strand
Strand 2
C
1554 1559anti-parallel
Strand 3
C
1539 1544anti-parallel
Strand 4
C
1517 1520anti-parallel
Strand 5
C
1571 1572anti-parallel
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There are 5 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1562 1567first strand
Strand 2
E
1554 1559anti-parallel
Strand 3
E
1539 1544anti-parallel
Strand 4
E
1517 1520anti-parallel
Strand 5
E
1571 1572anti-parallel
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There are 5 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
1562 1567first strand
Strand 2
G
1554 1559anti-parallel
Strand 3
G
1539 1544anti-parallel
Strand 4
G
1517 1520anti-parallel
Strand 5
G
1571 1572anti-parallel
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There are 5 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
1562 1567first strand
Strand 2
I
1554 1559anti-parallel
Strand 3
I
1539 1544anti-parallel
Strand 4
I
1517 1520anti-parallel
Strand 5
I
1571 1572anti-parallel
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There are 5 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
1562 1567first strand
Strand 2
K
1554 1559anti-parallel
Strand 3
K
1539 1544anti-parallel
Strand 4
K
1517 1520anti-parallel
Strand 5
K
1571 1573anti-parallel
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There are 5 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
1562 1567first strand
Strand 2
M
1554 1559anti-parallel
Strand 3
M
1539 1544anti-parallel
Strand 4
M
1517 1520anti-parallel
Strand 5
M
1571 1573anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il