Analysis of interatomic Contacts of Structural Units in PDB entry:
4CF3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CF3 entry

There are 8 chains in PDB entry 4CF3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 12PHE 17
A
 VAL 19ALA 236
B
 PRO 9PHE 17
B
 VAL 19ALA 236
C
 SER 12PHE 17
C
 VAL 19ALA 236
D
 SER 12PHE 17
D
 VAL 19ALA 236
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 4CF3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 28Right-handed 310
Helix 2
2
A
29 38Right-handed alpha
Helix 3
3
A
39 41Right-handed 310
Helix 4
4
A
42 61Right-handed alpha
Helix 5
5
A
65 81Right-handed alpha
Helix 6
6
A
86 98Right-handed alpha
Helix 7
7
A
105 116Right-handed alpha
Helix 8
8
A
133 138Right-handed alpha
Helix 9
9
A
140 144Right-handed 310
Helix 10
10
A
159 171Right-handed alpha
Helix 11
11
A
173 175Right-handed 310
Helix 12
12
A
183 192Right-handed alpha
Helix 13
13
A
222 233Right-handed alpha
Helix 14
14
A
234 236Right-handed 310
Helix 15
15
B
25 28Right-handed 310
Helix 16
16
B
29 38Right-handed alpha
Helix 17
17
B
39 41Right-handed 310
Helix 18
18
B
42 61Right-handed alpha
Helix 19
19
B
65 81Right-handed alpha
Helix 20
20
B
86 98Right-handed alpha
Helix 21
21
B
105 116Right-handed alpha
Helix 22
22
B
133 138Right-handed alpha
Helix 23
23
B
140 144Right-handed 310
Helix 24
24
B
151 153Right-handed 310
Helix 25
25
B
159 170Right-handed alpha
Helix 26
26
B
173 175Right-handed 310
Helix 27
27
B
183 192Right-handed alpha
Helix 28
28
B
222 236Right-handed alpha
Helix 29
29
C
25 28Right-handed 310
Helix 30
30
C
29 38Right-handed alpha
Helix 31
31
C
39 41Right-handed 310
Helix 32
32
C
42 61Right-handed alpha
Helix 33
33
C
65 81Right-handed alpha
Helix 34
34
C
86 98Right-handed alpha
Helix 35
35
C
105 116Right-handed alpha
Helix 36
36
C
133 138Right-handed alpha
Helix 37
37
C
140 144Right-handed 310
Helix 38
38
C
151 153Right-handed 310
Helix 39
39
C
159 171Right-handed alpha
Helix 40
40
C
173 175Right-handed 310
Helix 41
41
C
183 192Right-handed alpha
Helix 42
42
C
222 233Right-handed alpha
Helix 43
43
C
234 236Right-handed 310
Helix 44
44
D
25 28Right-handed 310
Helix 45
45
D
29 38Right-handed alpha
Helix 46
46
D
39 41Right-handed 310
Helix 47
47
D
42 61Right-handed alpha
Helix 48
48
D
65 81Right-handed alpha
Helix 49
49
D
86 99Right-handed alpha
Helix 50
50
D
105 116Right-handed alpha
Helix 51
51
D
133 138Right-handed alpha
Helix 52
52
D
140 144Right-handed 310
Helix 53
53
D
151 154Right-handed 310
Helix 54
54
D
159 170Right-handed alpha
Helix 55
55
D
173 175Right-handed 310
Helix 56
56
D
183 192Right-handed alpha
Helix 57
57
D
222 233Right-handed alpha
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There are 4 sheets in PDB entry 4CF3. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 149first strand
Strand 2
A
119 124parallel
Strand 3
A
14 17parallel
Strand 4
A
177 181parallel
Strand 5
A
196 200parallel
Strand 6
A
218 220parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 149first strand
Strand 2
B
119 124parallel
Strand 3
B
14 17parallel
Strand 4
B
177 181parallel
Strand 5
B
196 200parallel
Strand 6
B
218 220parallel
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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 149first strand
Strand 2
C
119 124parallel
Strand 3
C
14 17parallel
Strand 4
C
177 181parallel
Strand 5
C
196 200parallel
Strand 6
C
218 220parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
146 149first strand
Strand 2
D
119 124parallel
Strand 3
D
14 17parallel
Strand 4
D
177 181parallel
Strand 5
D
196 199parallel
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