Analysis of interatomic Contacts of Structural Units in PDB entry:
4CGZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CGZ entry

There are 3 chains in PDB entry 4CGZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 637SER 1290
B
 A 1 C 12
C
 G 1 C 17
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 4CGZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
641 645Right-handed 310
Helix 2
2
A
651 662Right-handed alpha
Helix 3
3
A
671 680Right-handed alpha
Helix 4
4
A
696 705Right-handed alpha
Helix 5
5
A
716 729Right-handed alpha
Helix 6
6
A
742 755Right-handed alpha
Helix 7
7
A
766 773Right-handed alpha
Helix 8
8
A
773 786Right-handed alpha
Helix 9
9
A
796 801Right-handed 310
Helix 10
10
A
808 813Right-handed 310
Helix 11
11
A
814 821Right-handed alpha
Helix 12
12
A
834 846Right-handed alpha
Helix 13
13
A
873 886Right-handed alpha
Helix 14
14
A
897 910Right-handed alpha
Helix 15
15
A
923 936Right-handed alpha
Helix 16
16
A
946 951Right-handed alpha
Helix 17
17
A
969 979Right-handed alpha
Helix 18
18
A
995 1008Right-handed alpha
Helix 19
19
A
1015 1032Right-handed alpha
Helix 20
20
A
1036 1044Right-handed alpha
Helix 21
21
A
1053 1058Right-handed alpha
Helix 22
22
A
1059 1062Right-handed 310
Helix 23
23
A
1063 1068Right-handed alpha
Helix 24
24
A
1077 1093Right-handed alpha
Helix 25
25
A
1110 1120Right-handed alpha
Helix 26
26
A
1140 1148Right-handed alpha
Helix 27
27
A
1176 1182Right-handed alpha
Helix 28
28
A
1209 1234Right-handed alpha
Helix 29
29
A
1236 1240Right-handed 310
Helix 30
30
A
1242 1253Right-handed alpha
Helix 31
31
A
1256 1261Right-handed alpha
Helix 32
32
A
1269 1274Right-handed alpha
Helix 33
33
A
1274 1284Right-handed alpha
Helix 34
34
A
1285 1289Right-handed 310
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There are 4 sheets in PDB entry 4CGZ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
734 737first strand
Strand 2
A
762 765parallel
Strand 3
A
709 713parallel
Strand 4
A
789 794parallel
Strand 5
A
826 830parallel
Strand 6
A
685 688parallel
Strand 7
A
851 853parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
862 868first strand
Strand 2
A
987 993parallel
Strand 3
A
960 963parallel
Strand 4
A
891 894parallel
Strand 5
A
942 945parallel
Strand 6
A
915 918parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1075 1076first strand
Strand 2
A
1188 1189anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1157 1160first strand
Strand 2
A
1168 1171anti-parallel
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