Analysis of interatomic Contacts of Structural Units in PDB entry:
4CI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CI6 entry

There are 2 chains in PDB entry 4CI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5CYS 374
B
 LYS 108MET 729
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 42 helices in PDB entry 4CI6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 61Right-handed alpha
Helix 2
2
A
78 92Right-handed alpha
Helix 3
3
A
97 101Right-handed 310
Helix 4
4
A
112 126Right-handed alpha
Helix 5
5
A
137 144Right-handed alpha
Helix 6
6
A
172 175Right-handed 310
Helix 7
7
A
181 194Right-handed alpha
Helix 8
8
A
195 197Right-handed 310
Helix 9
9
A
202 217Right-handed alpha
Helix 10
10
A
222 233Right-handed alpha
Helix 11
11
A
252 260Right-handed alpha
Helix 12
12
A
263 268Right-handed 310
Helix 13
13
A
273 283Right-handed alpha
Helix 14
14
A
286 295Right-handed alpha
Helix 15
15
A
302 306Right-handed 310
Helix 16
16
A
308 321Right-handed alpha
Helix 17
17
A
337 349Right-handed alpha
Helix 18
18
A
359 366Right-handed alpha
Helix 19
19
A
369 374Right-handed alpha
Helix 20
20
B
109 113Right-handed 310
Helix 21
21
B
168 184Right-handed alpha
Helix 22
22
B
219 232Right-handed alpha
Helix 23
23
B
236 261Right-handed alpha
Helix 24
24
B
269 271Right-handed 310
Helix 25
25
B
317 335Right-handed alpha
Helix 26
26
B
336 339Right-handed 310
Helix 27
27
B
343 347Right-handed 310
Helix 28
28
B
376 387Right-handed alpha
Helix 29
29
B
395 400Right-handed alpha
Helix 30
30
B
402 407Right-handed alpha
Helix 31
31
B
411 424Right-handed alpha
Helix 32
32
B
438 458Right-handed alpha
Helix 33
33
B
462 483Right-handed alpha
Helix 34
34
B
487 508Right-handed alpha
Helix 35
35
B
536 548Right-handed alpha
Helix 36
36
B
552 554Right-handed 310
Helix 37
37
B
555 580Right-handed alpha
Helix 38
38
B
584 627Right-handed alpha
Helix 39
39
B
629 642Right-handed alpha
Helix 40
40
B
655 673Right-handed alpha
Helix 41
41
B
676 695Right-handed alpha
Helix 42
42
B
701 729Right-handed alpha
Back to top of page

There are 13 sheets in PDB entry 4CI6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, BA, BB, BC, BD, BE,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
16 21anti-parallel
Strand 3
A
8 12anti-parallel
Strand 4
A
103 107parallel
Strand 5
A
131 136parallel
Strand 6
A
357 358anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
35 38anti-parallel
Strand 3
A
65 68anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 72first strand
Strand 2
A
75 76anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
160 166parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
160 166anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 330first strand
Strand 2
A
297 300parallel
Strand 3
A
150 155parallel
Strand 4
A
160 166anti-parallel
Strand 5
A
169 170parallel
Back to list of sheets
Back to top of page

There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 330first strand
Strand 2
A
297 300parallel
Strand 3
A
150 155parallel
Strand 4
A
160 166anti-parallel
Strand 5
A
176 178anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 250first strand
Strand 2
A
238 241anti-parallel
Strand 3
B
647 648parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 117first strand
Strand 2
B
193 201anti-parallel
Strand 3
B
204 212anti-parallel
Strand 4
B
157 160anti-parallel
Strand 5
B
145 148anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 218first strand
Strand 2
B
273 276anti-parallel
Strand 3
B
281 284anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
263 264first strand
Strand 2
B
291 292anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 350first strand
Strand 2
B
371 372parallel
Back to list of sheets
Back to top of page

There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 359first strand
Strand 2
B
365 367anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il