Analysis of interatomic Contacts of Structural Units in PDB entry:
4CJ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CJ7 entry

There are 2 chains in PDB entry 4CJ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5PRO 430
B
 SER 5PRO 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 44 helices in PDB entry 4CJ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 12Right-handed alpha
Helix 2
2
A
47 51Right-handed 310
Helix 3
3
A
55 61Right-handed alpha
Helix 4
4
A
66 72Right-handed alpha
Helix 5
5
A
79 83Right-handed alpha
Helix 6
6
A
97 114Right-handed alpha
Helix 7
7
A
136 151Right-handed alpha
Helix 8
8
A
164 173Right-handed alpha
Helix 9
9
A
209 223Right-handed alpha
Helix 10
10
A
224 229Right-handed alpha
Helix 11
11
A
230 242Right-handed alpha
Helix 12
12
A
247 257Right-handed alpha
Helix 13
13
A
258 263Right-handed 310
Helix 14
14
A
280 282Right-handed 310
Helix 15
15
A
283 293Right-handed alpha
Helix 16
16
A
296 301Right-handed alpha
Helix 17
17
A
326 336Right-handed alpha
Helix 18
18
A
341 346Right-handed alpha
Helix 19
19
A
353 357Right-handed 310
Helix 20
20
A
370 383Right-handed alpha
Helix 21
21
A
383 390Right-handed alpha
Helix 22
22
A
400 412Right-handed alpha
Helix 23
23
B
6 11Right-handed 310
Helix 24
24
B
55 61Right-handed alpha
Helix 25
25
B
66 72Right-handed alpha
Helix 26
26
B
97 114Right-handed alpha
Helix 27
27
B
136 150Right-handed alpha
Helix 28
28
B
164 173Right-handed alpha
Helix 29
29
B
197 201Right-handed 310
Helix 30
30
B
207 223Right-handed alpha
Helix 31
31
B
224 229Right-handed alpha
Helix 32
32
B
230 242Right-handed alpha
Helix 33
33
B
247 257Right-handed alpha
Helix 34
34
B
258 262Right-handed 310
Helix 35
35
B
277 282Right-handed 310
Helix 36
36
B
283 293Right-handed alpha
Helix 37
37
B
296 301Right-handed alpha
Helix 38
38
B
325 335Right-handed alpha
Helix 39
39
B
341 346Right-handed alpha
Helix 40
40
B
353 357Right-handed 310
Helix 41
41
B
370 383Right-handed alpha
Helix 42
42
B
383 390Right-handed alpha
Helix 43
43
B
397 399Right-handed 310
Helix 44
44
B
400 412Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 4CJ7. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
22 27anti-parallel
Strand 3
A
13 17anti-parallel
Strand 4
A
125 131parallel
Strand 5
A
156 163parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
40 42anti-parallel
Strand 3
A
84 85anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 314first strand
Strand 2
A
319 321anti-parallel
Strand 3
A
202 204parallel
Strand 4
A
187 193anti-parallel
Strand 5
A
176 182anti-parallel
Strand 6
A
348 352parallel
Strand 7
A
391 394parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 269first strand
Strand 2
A
272 276anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 37first strand
Strand 2
B
22 27anti-parallel
Strand 3
B
13 17anti-parallel
Strand 4
B
125 131parallel
Strand 5
B
156 163parallel
Back to list of sheets
Back to top of page

There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 64first strand
Strand 2
B
40 42anti-parallel
Strand 3
B
84 85anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
313 314first strand
Strand 2
B
319 321anti-parallel
Strand 3
B
202 204parallel
Strand 4
B
187 193anti-parallel
Strand 5
B
176 182anti-parallel
Strand 6
B
348 352parallel
Strand 7
B
391 394parallel
Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 267first strand
Strand 2
B
273 276anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il