Analysis of interatomic Contacts of Structural Units in PDB entry:
4CMN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CMN entry

There is 1 chain in PDB entry 4CMN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 219ASN 559
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4CMN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
221 230Right-handed alpha
Helix 2
2
A
231 233Right-handed 310
Helix 3
3
A
258 263Right-handed alpha
Helix 4
4
A
282 287Right-handed alpha
Helix 5
5
A
291 305Right-handed alpha
Helix 6
6
A
331 334Right-handed 310
Helix 7
7
A
347 351Right-handed 310
Helix 8
8
A
382 397Right-handed alpha
Helix 9
9
A
412 414Right-handed 310
Helix 10
10
A
431 441Right-handed alpha
Helix 11
11
A
443 449Right-handed alpha
Helix 12
12
A
451 459Right-handed alpha
Helix 13
13
A
539 557Right-handed alpha
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There are 5 sheets in PDB entry 4CMN. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 319first strand
Strand 2
A
322 329anti-parallel
Strand 3
A
271 277anti-parallel
Strand 4
A
235 248parallel
Strand 5
A
527 538anti-parallel
Strand 6
A
514 515anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 319first strand
Strand 2
A
322 329anti-parallel
Strand 3
A
271 277anti-parallel
Strand 4
A
235 248parallel
Strand 5
A
527 538anti-parallel
Strand 6
A
508 510anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
514 515first strand
Strand 2
A
527 538anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 345first strand
Strand 2
A
356 364anti-parallel
Strand 3
A
367 375anti-parallel
Strand 4
A
416 422parallel
Strand 5
A
499 504anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 399first strand
Strand 2
A
409 410anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il