Analysis of interatomic Contacts of Structural Units in PDB entry:
4CMR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CMR entry

There are 2 chains in PDB entry 4CMR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ASP 597
B
 MSE 1GLY 595
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 4CMR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 68Right-handed alpha
Helix 2
2
A
80 91Right-handed alpha
Helix 3
3
A
91 105Right-handed alpha
Helix 4
4
A
117 121Right-handed 310
Helix 5
5
A
122 137Right-handed alpha
Helix 6
6
A
137 142Right-handed alpha
Helix 7
7
A
151 155Right-handed 310
Helix 8
8
A
157 167Right-handed alpha
Helix 9
9
A
185 190Right-handed alpha
Helix 10
10
A
209 218Right-handed alpha
Helix 11
11
A
222 232Right-handed alpha
Helix 12
12
A
236 243Right-handed alpha
Helix 13
13
A
255 259Right-handed 310
Helix 14
14
A
262 277Right-handed alpha
Helix 15
15
A
283 293Right-handed alpha
Helix 16
16
A
304 307Right-handed 310
Helix 17
17
A
320 324Right-handed 310
Helix 18
18
A
331 336Right-handed alpha
Helix 19
19
A
356 383Right-handed alpha
Helix 20
20
A
388 399Right-handed alpha
Helix 21
21
A
399 404Right-handed alpha
Helix 22
22
A
404 411Right-handed alpha
Helix 23
23
A
416 422Right-handed alpha
Helix 24
24
A
423 425Right-handed 310
Helix 25
25
A
428 445Right-handed alpha
Helix 26
26
A
448 453Right-handed 310
Helix 27
27
A
458 482Right-handed alpha
Helix 28
28
A
485 499Right-handed alpha
Helix 29
29
A
502 507Right-handed alpha
Helix 30
30
A
508 512Right-handed 310
Helix 31
31
A
521 530Right-handed alpha
Helix 32
32
A
539 553Right-handed alpha
Helix 33
33
A
554 565Right-handed alpha
Helix 34
34
A
566 570Right-handed 310
Helix 35
35
A
577 581Right-handed 310
Helix 36
36
B
51 69Right-handed alpha
Helix 37
37
B
80 91Right-handed alpha
Helix 38
38
B
91 105Right-handed alpha
Helix 39
39
B
117 121Right-handed 310
Helix 40
40
B
122 142Right-handed alpha
Helix 41
41
B
151 155Right-handed 310
Helix 42
42
B
157 167Right-handed alpha
Helix 43
43
B
185 190Right-handed alpha
Helix 44
44
B
209 218Right-handed alpha
Helix 45
45
B
222 232Right-handed alpha
Helix 46
46
B
236 243Right-handed alpha
Helix 47
47
B
255 259Right-handed 310
Helix 48
48
B
262 277Right-handed alpha
Helix 49
49
B
283 293Right-handed alpha
Helix 50
50
B
320 324Right-handed 310
Helix 51
51
B
331 336Right-handed alpha
Helix 52
52
B
356 384Right-handed alpha
Helix 53
53
B
388 399Right-handed alpha
Helix 54
54
B
399 404Right-handed alpha
Helix 55
55
B
404 411Right-handed alpha
Helix 56
56
B
416 422Right-handed alpha
Helix 57
57
B
423 425Right-handed 310
Helix 58
58
B
428 445Right-handed alpha
Helix 59
59
B
448 453Right-handed 310
Helix 60
60
B
458 481Right-handed alpha
Helix 61
61
B
486 499Right-handed alpha
Helix 62
62
B
502 507Right-handed alpha
Helix 63
63
B
508 512Right-handed 310
Helix 64
64
B
521 529Right-handed alpha
Helix 65
65
B
539 553Right-handed alpha
Helix 66
66
B
554 565Right-handed alpha
Helix 67
67
B
566 570Right-handed 310
Helix 68
68
B
577 581Right-handed 310
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There are 18 sheets in PDB entry 4CMR. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, BA, BB, BC, BD, BE, BF, BG, BH, BI,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 108first strand
Strand 2
A
76 79parallel
Strand 3
A
3 11parallel
Strand 4
A
280 281parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 108first strand
Strand 2
A
76 79parallel
Strand 3
A
3 11parallel
Strand 4
A
246 253parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 281first strand
Strand 2
A
3 11parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 20first strand
Strand 2
A
31 33anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 49first strand
Strand 2
A
38 42anti-parallel
Strand 3
A
584 585anti-parallel
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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 111first strand
Strand 2
A
146 150parallel
Strand 3
A
171 177parallel
Strand 4
A
201 208parallel
Strand 5
A
194 198anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 182first strand
Strand 2
A
310 311anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
343 344anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 349first strand
Strand 2
A
352 355anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 108first strand
Strand 2
B
76 79parallel
Strand 3
B
3 11parallel
Strand 4
B
280 281parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 108first strand
Strand 2
B
76 79parallel
Strand 3
B
3 11parallel
Strand 4
B
246 253parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
280 281first strand
Strand 2
B
3 11parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 20first strand
Strand 2
B
31 33anti-parallel
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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 49first strand
Strand 2
B
38 42anti-parallel
Strand 3
B
584 585anti-parallel
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There are 5 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 111first strand
Strand 2
B
146 150parallel
Strand 3
B
171 177parallel
Strand 4
B
201 208parallel
Strand 5
B
194 198anti-parallel
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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 182first strand
Strand 2
B
310 311anti-parallel
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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 338first strand
Strand 2
B
343 344anti-parallel
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There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
346 349first strand
Strand 2
B
352 355anti-parallel
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