Analysis of interatomic Contacts of Structural Units in PDB entry:
4CNM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CNM entry

There is 1 chain in PDB entry 4CNM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 57CYS 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 4CNM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
187 191Right-handed 310
Helix 2
2
A
194 205Right-handed alpha
Helix 3
3
A
206 208Right-handed 310
Helix 4
4
A
226 233Right-handed alpha
Helix 5
5
A
274 282Right-handed alpha
Helix 6
6
A
299 301Right-handed 310
Helix 7
7
A
302 312Right-handed alpha
Helix 8
8
A
317 321Right-handed 310
Helix 9
9
A
326 330Right-handed 310
Helix 10
10
A
334 337Right-handed 310
Helix 11
11
A
338 342Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 4CNM. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 11 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
74 76anti-parallel
Strand 3
A
95 97parallel
Strand 4
A
122 124parallel
Strand 5
A
146 148parallel
Strand 6
A
177 179parallel
Strand 7
A
214 216parallel
Strand 8
A
238 240parallel
Strand 9
A
262 264parallel
Strand 10
A
288 290parallel
Strand 11
A
315 316parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 106first strand
Strand 2
A
130 133parallel
Strand 3
A
156 157parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 297first strand
Strand 2
A
323 325parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il