Analysis of interatomic Contacts of Structural Units in PDB entry:
4COF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4COF entry

There are 4 chains in PDB entry 4COF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1VAL 447
B
 SER 10VAL 447
C
 SER 10VAL 447
D
 SER 10SER 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4COF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 20Right-handed alpha
Helix 2
2
A
85 90Right-handed alpha
Helix 3
3
A
218 241Right-handed alpha
Helix 4
4
A
247 271Right-handed alpha
Helix 5
5
A
280 305Right-handed alpha
Helix 6
6
A
310 446Right-handed alpha
Helix 7
7
B
10 20Right-handed alpha
Helix 8
8
B
85 90Right-handed alpha
Helix 9
9
B
218 241Right-handed alpha
Helix 10
10
B
247 271Right-handed alpha
Helix 11
11
B
280 305Right-handed alpha
Helix 12
12
B
310 446Right-handed alpha
Helix 13
13
C
10 20Right-handed alpha
Helix 14
14
C
85 90Right-handed alpha
Helix 15
15
C
218 241Right-handed alpha
Helix 16
16
C
247 271Right-handed alpha
Helix 17
17
C
280 305Right-handed alpha
Helix 18
18
C
310 446Right-handed alpha
Helix 19
19
D
10 20Right-handed alpha
Helix 20
20
D
85 90Right-handed alpha
Helix 21
21
D
218 241Right-handed alpha
Helix 22
22
D
247 271Right-handed alpha
Helix 23
23
D
280 305Right-handed alpha
Helix 24
24
D
310 446Right-handed alpha
Helix 25
25
E
10 20Right-handed alpha
Helix 26
26
E
85 90Right-handed alpha
Helix 27
27
E
218 241Right-handed alpha
Helix 28
28
E
247 271Right-handed alpha
Helix 29
29
E
280 305Right-handed alpha
Helix 30
30
E
310 446Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 4COF.

There are 60 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 51first strand
Strand 2
A
56 69first strand
Strand 3
A
81 83first strand
Strand 4
A
96 98first strand
Strand 5
A
101 106first strand
Strand 6
A
114 119first strand
Strand 7
A
123 135first strand
Strand 8
A
146 156first strand
Strand 9
A
164 168first strand
Strand 10
A
175 177first strand
Strand 11
A
186 199first strand
Strand 12
A
204 216first strand
Strand 13
B
36 51first strand
Strand 14
B
56 69first strand
Strand 15
B
81 83first strand
Strand 16
B
96 98first strand
Strand 17
B
101 106first strand
Strand 18
B
114 119first strand
Strand 19
B
123 135first strand
Strand 20
B
146 156first strand
Strand 21
B
164 168first strand
Strand 22
B
175 177first strand
Strand 23
B
186 199first strand
Strand 24
B
204 216first strand
Strand 25
C
36 51first strand
Strand 26
C
56 69first strand
Strand 27
C
81 83first strand
Strand 28
C
96 98first strand
Strand 29
C
101 106first strand
Strand 30
C
114 119first strand
Strand 31
C
123 135first strand
Strand 32
C
146 156first strand
Strand 33
C
164 168first strand
Strand 34
C
175 177first strand
Strand 35
C
186 199first strand
Strand 36
C
204 216first strand
Strand 37
D
36 51first strand
Strand 38
D
56 69first strand
Strand 39
D
81 83first strand
Strand 40
D
96 98first strand
Strand 41
D
101 106first strand
Strand 42
D
114 119first strand
Strand 43
D
123 135first strand
Strand 44
D
146 156first strand
Strand 45
D
164 168first strand
Strand 46
D
175 177first strand
Strand 47
D
186 199first strand
Strand 48
D
204 216first strand
Strand 49
E
36 51first strand
Strand 50
E
56 69first strand
Strand 51
E
81 83first strand
Strand 52
E
96 98first strand
Strand 53
E
101 106first strand
Strand 54
E
114 119first strand
Strand 55
E
123 135first strand
Strand 56
E
146 156first strand
Strand 57
E
164 168first strand
Strand 58
E
175 177first strand
Strand 59
E
186 199first strand
Strand 60
E
204 216first strand
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