Analysis of interatomic Contacts of Structural Units in PDB entry:
4CP8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CP8 entry

There are 6 chains in PDB entry 4CP8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 18LEU 465
B
 HIS 18ASP 464
C
 HIS 18LEU 465
D
 HIS 18ASP 464
E
 HIS 18LYS 467
F
 THR 20HIS 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 4CP8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 31Right-handed alpha
Helix 2
2
A
34 49Right-handed alpha
Helix 3
3
A
60 77Right-handed alpha
Helix 4
4
A
116 125Right-handed alpha
Helix 5
5
A
136 140Right-handed 310
Helix 6
6
A
166 175Right-handed alpha
Helix 7
7
A
191 197Right-handed alpha
Helix 8
8
A
230 242Right-handed alpha
Helix 9
9
A
275 278Right-handed 310
Helix 10
10
A
283 300Right-handed alpha
Helix 11
11
A
309 322Right-handed alpha
Helix 12
12
A
325 332Right-handed alpha
Helix 13
13
A
332 339Right-handed alpha
Helix 14
14
A
340 343Right-handed 310
Helix 15
15
A
344 353Right-handed alpha
Helix 16
16
A
354 357Right-handed 310
Helix 17
17
A
358 381Right-handed alpha
Helix 18
18
A
396 403Right-handed alpha
Helix 19
19
A
405 412Right-handed alpha
Helix 20
20
A
449 464Right-handed alpha
Helix 21
21
B
21 31Right-handed alpha
Helix 22
22
B
34 49Right-handed alpha
Helix 23
23
B
60 77Right-handed alpha
Helix 24
24
B
116 125Right-handed alpha
Helix 25
25
B
136 140Right-handed 310
Helix 26
26
B
166 175Right-handed alpha
Helix 27
27
B
191 197Right-handed alpha
Helix 28
28
B
230 242Right-handed alpha
Helix 29
29
B
275 278Right-handed 310
Helix 30
30
B
283 300Right-handed alpha
Helix 31
31
B
309 322Right-handed alpha
Helix 32
32
B
325 332Right-handed alpha
Helix 33
33
B
332 339Right-handed alpha
Helix 34
34
B
340 343Right-handed 310
Helix 35
35
B
344 353Right-handed alpha
Helix 36
36
B
354 357Right-handed 310
Helix 37
37
B
358 381Right-handed alpha
Helix 38
38
B
396 403Right-handed alpha
Helix 39
39
B
405 412Right-handed alpha
Helix 40
40
B
449 464Right-handed alpha
Helix 41
41
C
21 31Right-handed alpha
Helix 42
42
C
34 49Right-handed alpha
Helix 43
43
C
60 77Right-handed alpha
Helix 44
44
C
116 125Right-handed alpha
Helix 45
45
C
136 140Right-handed 310
Helix 46
46
C
166 175Right-handed alpha
Helix 47
47
C
191 197Right-handed alpha
Helix 48
48
C
230 242Right-handed alpha
Helix 49
49
C
254 260Right-handed 310
Helix 50
50
C
275 278Right-handed 310
Helix 51
51
C
283 300Right-handed alpha
Helix 52
52
C
309 322Right-handed alpha
Helix 53
53
C
325 339Right-handed alpha
Helix 54
54
C
340 343Right-handed 310
Helix 55
55
C
344 353Right-handed alpha
Helix 56
56
C
354 357Right-handed 310
Helix 57
57
C
358 381Right-handed alpha
Helix 58
58
C
396 403Right-handed alpha
Helix 59
59
C
405 412Right-handed alpha
Helix 60
60
C
449 464Right-handed alpha
Helix 61
61
D
21 31Right-handed alpha
Helix 62
62
D
34 50Right-handed alpha
Helix 63
63
D
60 77Right-handed alpha
Helix 64
64
D
116 125Right-handed alpha
Helix 65
65
D
136 140Right-handed 310
Helix 66
66
D
166 175Right-handed alpha
Helix 67
67
D
191 197Right-handed alpha
Helix 68
68
D
230 242Right-handed alpha
Helix 69
69
D
255 260Right-handed 310
Helix 70
70
D
275 278Right-handed 310
Helix 71
71
D
283 300Right-handed alpha
Helix 72
72
D
309 322Right-handed alpha
Helix 73
73
D
325 339Right-handed alpha
Helix 74
74
D
340 343Right-handed 310
Helix 75
75
D
344 353Right-handed alpha
Helix 76
76
D
354 357Right-handed 310
Helix 77
77
D
358 381Right-handed alpha
Helix 78
78
D
396 403Right-handed alpha
Helix 79
79
D
405 412Right-handed alpha
Helix 80
80
D
449 463Right-handed alpha
Helix 81
81
E
21 31Right-handed alpha
Helix 82
82
E
34 49Right-handed alpha
Helix 83
83
E
60 77Right-handed alpha
Helix 84
84
E
116 125Right-handed alpha
Helix 85
85
E
136 140Right-handed 310
Helix 86
86
E
166 175Right-handed alpha
Helix 87
87
E
191 197Right-handed alpha
Helix 88
88
E
230 242Right-handed alpha
Helix 89
89
E
255 260Right-handed alpha
Helix 90
90
E
275 278Right-handed 310
Helix 91
91
E
283 300Right-handed alpha
Helix 92
92
E
309 322Right-handed alpha
Helix 93
93
E
325 339Right-handed alpha
Helix 94
94
E
340 343Right-handed 310
Helix 95
95
E
344 353Right-handed alpha
Helix 96
96
E
354 357Right-handed 310
Helix 97
97
E
358 381Right-handed alpha
Helix 98
98
E
396 403Right-handed alpha
Helix 99
99
E
405 412Right-handed alpha
Helix 100
100
E
449 463Right-handed alpha
Helix 101
101
F
21 31Right-handed alpha
Helix 102
102
F
34 49Right-handed alpha
Helix 103
103
F
60 77Right-handed alpha
Helix 104
104
F
116 125Right-handed alpha
Helix 105
105
F
136 140Right-handed 310
Helix 106
106
F
166 175Right-handed alpha
Helix 107
107
F
191 197Right-handed alpha
Helix 108
108
F
230 242Right-handed alpha
Helix 109
109
F
275 278Right-handed 310
Helix 110
110
F
283 300Right-handed alpha
Helix 111
111
F
309 322Right-handed alpha
Helix 112
112
F
325 332Right-handed alpha
Helix 113
113
F
332 339Right-handed alpha
Helix 114
114
F
340 343Right-handed 310
Helix 115
115
F
344 353Right-handed alpha
Helix 116
116
F
354 357Right-handed 310
Helix 117
117
F
358 381Right-handed alpha
Helix 118
118
F
396 403Right-handed alpha
Helix 119
119
F
405 412Right-handed alpha
Helix 120
120
F
449 463Right-handed alpha
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There are 6 sheets in PDB entry 4CP8. Click on sheet of interest to get list of strands forming it: AA, BA, CA, DA, EA, FA,

There are 11 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
128 133anti-parallel
Strand 3
A
87 91parallel
Strand 4
A
180 185parallel
Strand 5
A
223 228anti-parallel
Strand 6
A
200 203anti-parallel
Strand 7
A
423 432anti-parallel
Strand 8
A
438 446anti-parallel
Strand 9
A
385 389anti-parallel
Strand 10
A
268 273parallel
Strand 11
A
302 307parallel
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There are 11 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
128 133anti-parallel
Strand 3
B
87 91parallel
Strand 4
B
180 185parallel
Strand 5
B
223 228anti-parallel
Strand 6
B
200 203anti-parallel
Strand 7
B
423 432anti-parallel
Strand 8
B
438 446anti-parallel
Strand 9
B
385 389anti-parallel
Strand 10
B
268 273parallel
Strand 11
B
302 307parallel
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There are 11 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
55 58first strand
Strand 2
C
128 133anti-parallel
Strand 3
C
87 91parallel
Strand 4
C
180 185parallel
Strand 5
C
223 228anti-parallel
Strand 6
C
200 203anti-parallel
Strand 7
C
423 432anti-parallel
Strand 8
C
438 446anti-parallel
Strand 9
C
385 389anti-parallel
Strand 10
C
268 273parallel
Strand 11
C
302 307parallel
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There are 11 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
55 58first strand
Strand 2
D
128 133anti-parallel
Strand 3
D
87 91parallel
Strand 4
D
180 185parallel
Strand 5
D
223 228anti-parallel
Strand 6
D
200 203anti-parallel
Strand 7
D
423 432anti-parallel
Strand 8
D
438 446anti-parallel
Strand 9
D
385 389anti-parallel
Strand 10
D
268 273parallel
Strand 11
D
302 307parallel
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There are 11 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
55 58first strand
Strand 2
E
128 133anti-parallel
Strand 3
E
87 91parallel
Strand 4
E
180 185parallel
Strand 5
E
223 228anti-parallel
Strand 6
E
200 203anti-parallel
Strand 7
E
423 432anti-parallel
Strand 8
E
438 446anti-parallel
Strand 9
E
385 389anti-parallel
Strand 10
E
268 273parallel
Strand 11
E
302 307parallel
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There are 11 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
55 58first strand
Strand 2
F
128 133anti-parallel
Strand 3
F
87 91parallel
Strand 4
F
180 185parallel
Strand 5
F
223 228anti-parallel
Strand 6
F
200 203anti-parallel
Strand 7
F
423 432anti-parallel
Strand 8
F
438 446anti-parallel
Strand 9
F
385 389anti-parallel
Strand 10
F
268 273parallel
Strand 11
F
302 307parallel
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