Analysis of interatomic Contacts of Structural Units in PDB entry:
4CVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CVH entry

There is 1 chain in PDB entry 4CVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 41ALA 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4CVH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
76 86Right-handed alpha
Helix 2
2
A
98 100Right-handed 310
Helix 3
3
A
101 113Right-handed alpha
Helix 4
4
A
125 138Right-handed alpha
Helix 5
5
A
163 178Right-handed alpha
Helix 6
6
A
204 207Right-handed 310
Helix 7
7
A
219 229Right-handed alpha
Helix 8
8
A
230 237Right-handed alpha
Helix 9
9
A
239 249Right-handed alpha
Helix 10
10
A
258 262Right-handed 310
Helix 11
11
A
266 281Right-handed alpha
Helix 12
12
A
292 310Right-handed alpha
Helix 13
13
A
348 361Right-handed alpha
Helix 14
14
A
362 367Right-handed alpha
Helix 15
15
A
384 392Right-handed alpha
Helix 16
16
A
393 403Right-handed alpha
Helix 17
17
A
418 440Right-handed alpha
Helix 18
18
A
441 445Right-handed 310
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There are 4 sheets in PDB entry 4CVH. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 121first strand
Strand 2
A
90 97parallel
Strand 3
A
47 52parallel
Strand 4
A
151 154parallel
Strand 5
A
209 218anti-parallel
Strand 6
A
179 185anti-parallel
Strand 7
A
253 256parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
74 75anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
199 202anti-parallel
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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 319first strand
Strand 2
A
284 289parallel
Strand 3
A
337 342parallel
Strand 4
A
369 377parallel
Strand 5
A
406 414parallel
Strand 6
A
448 450parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il