Analysis of interatomic Contacts of Structural Units in PDB entry:
4CVU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CVU entry

There is 1 chain in PDB entry 4CVU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 26PRO 942
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4CVU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 36Right-handed 310
Helix 2
AA2
A
56 64Right-handed alpha
Helix 3
AA3
A
74 79Right-handed alpha
Helix 4
AA4
A
79 84Right-handed alpha
Helix 5
AA5
A
139 146Right-handed alpha
Helix 6
AA6
A
158 169Right-handed alpha
Helix 7
AA7
A
187 191Right-handed 310
Helix 8
AA8
A
194 199Right-handed 310
Helix 9
AA9
A
359 366Right-handed alpha
Helix 10
AB1
A
395 399Right-handed 310
Helix 11
AB2
A
400 414Right-handed alpha
Helix 12
AB3
A
429 440Right-handed alpha
Helix 13
AB4
A
457 476Right-handed alpha
Helix 14
AB5
A
493 502Right-handed alpha
Helix 15
AB6
A
505 518Right-handed alpha
Helix 16
AB7
A
518 529Right-handed alpha
Helix 17
AB8
A
582 586Right-handed 310
Helix 18
AB9
A
602 610Right-handed alpha
Helix 19
AC1
A
611 615Right-handed 310
Helix 20
AC2
A
619 626Right-handed alpha
Helix 21
AC3
A
637 656Right-handed alpha
Helix 22
AC4
A
663 693Right-handed alpha
Helix 23
AC5
A
694 696Right-handed 310
Helix 24
AC6
A
728 737Right-handed alpha
Helix 25
AC7
A
781 787Right-handed 310
Helix 26
AC8
A
816 820Right-handed 310
Helix 27
AC9
A
853 857Right-handed 310
Helix 28
AD1
A
925 931Right-handed 310
Helix 29
AD2
A
935 941Right-handed 310
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There are 12 sheets in PDB entry 4CVU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
215 221anti-parallel
Strand 3
A
103 109anti-parallel
Strand 4
A
135 138anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
38 41anti-parallel
Strand 3
A
87 91anti-parallel
Strand 4
A
152 156anti-parallel
Strand 5
A
116 120anti-parallel
Strand 6
A
123 126anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 237first strand
Strand 2
A
252 261anti-parallel
Strand 3
A
298 305anti-parallel
Strand 4
A
290 294anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 288first strand
Strand 2
A
268 276anti-parallel
Strand 3
A
324 332anti-parallel
Strand 4
A
340 346anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 354first strand
Strand 2
A
374 377anti-parallel
Strand 3
A
380 381anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
534 535first strand
Strand 2
A
481 485parallel
Strand 3
A
442 446parallel
Strand 4
A
418 421parallel
Strand 5
A
384 389parallel
Strand 6
A
702 705parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 546first strand
Strand 2
A
554 556anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 572first strand
Strand 2
A
592 595parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
740 747first strand
Strand 2
A
752 759anti-parallel
Strand 3
A
799 807anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
790 795first strand
Strand 2
A
765 774anti-parallel
Strand 3
A
821 830anti-parallel
Strand 4
A
841 849anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
864 869first strand
Strand 2
A
874 879anti-parallel
Strand 3
A
911 921anti-parallel
Strand 4
A
895 899anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
904 906first strand
Strand 2
A
884 890anti-parallel
Strand 3
A
932 934anti-parallel
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