Analysis of interatomic Contacts of Structural Units in PDB entry:
4CW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CW5 entry

There are 2 chains in PDB entry 4CW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 304GLY 752
B
 PRO 304ARG 520
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 4CW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
307 312Right-handed alpha
Helix 2
2
A
314 321Right-handed alpha
Helix 3
3
A
338 348Right-handed alpha
Helix 4
4
A
360 375Right-handed alpha
Helix 5
5
A
391 405Right-handed alpha
Helix 6
6
A
419 429Right-handed alpha
Helix 7
7
A
450 459Right-handed alpha
Helix 8
8
A
462 472Right-handed alpha
Helix 9
9
A
476 483Right-handed alpha
Helix 10
10
A
484 486Right-handed 310
Helix 11
11
A
509 526Right-handed alpha
Helix 12
12
A
541 551Right-handed alpha
Helix 13
13
A
559 564Right-handed alpha
Helix 14
14
A
571 580Right-handed alpha
Helix 15
15
A
582 584Right-handed 310
Helix 16
16
A
609 624Right-handed alpha
Helix 17
17
A
631 641Right-handed alpha
Helix 18
18
A
646 658Right-handed alpha
Helix 19
19
A
659 669Right-handed alpha
Helix 20
20
A
669 691Right-handed alpha
Helix 21
21
A
705 716Right-handed alpha
Helix 22
22
A
718 722Right-handed 310
Helix 23
23
A
722 726Right-handed 310
Helix 24
24
A
727 752Right-handed alpha
Helix 25
25
B
307 312Right-handed alpha
Helix 26
26
B
314 321Right-handed alpha
Helix 27
27
B
338 348Right-handed alpha
Helix 28
28
B
360 375Right-handed alpha
Helix 29
29
B
391 405Right-handed alpha
Helix 30
30
B
419 428Right-handed alpha
Helix 31
31
B
450 459Right-handed alpha
Helix 32
32
B
462 472Right-handed alpha
Helix 33
33
B
476 483Right-handed alpha
Helix 34
34
B
484 486Right-handed 310
Helix 35
35
B
510 526Right-handed alpha
Helix 36
36
B
541 551Right-handed alpha
Helix 37
37
B
559 564Right-handed alpha
Helix 38
38
B
571 580Right-handed alpha
Helix 39
39
B
582 584Right-handed 310
Helix 40
40
B
609 624Right-handed alpha
Helix 41
41
B
631 641Right-handed alpha
Helix 42
42
B
646 658Right-handed alpha
Helix 43
43
B
659 669Right-handed alpha
Helix 44
44
B
669 691Right-handed alpha
Helix 45
45
B
705 716Right-handed alpha
Helix 46
46
B
718 722Right-handed 310
Helix 47
47
B
722 726Right-handed 310
Helix 48
48
B
727 752Right-handed alpha
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There are 6 sheets in PDB entry 4CW5. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 329first strand
Strand 2
A
556 558parallel
Strand 3
A
532 536parallel
Strand 4
A
491 495parallel
Strand 5
A
443 448parallel
Strand 6
A
409 413parallel
Strand 7
A
382 386parallel
Strand 8
A
351 354parallel
Strand 9
A
327 329parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
438 439anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
586 590first strand
Strand 2
A
600 604anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 329first strand
Strand 2
B
556 558parallel
Strand 3
B
532 536parallel
Strand 4
B
491 495parallel
Strand 5
B
443 448parallel
Strand 6
B
409 413parallel
Strand 7
B
382 386parallel
Strand 8
B
351 354parallel
Strand 9
B
327 329parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 432first strand
Strand 2
B
438 439anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
586 590first strand
Strand 2
B
600 604anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il