Analysis of interatomic Contacts of Structural Units in PDB entry:
4D09


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4D09 entry

There are 4 chains in PDB entry 4D09 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 579GLU 918
B
 ASP 580ASP 917
C
 ASP 588LEU 916
D
 ILE 590PHE 915
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 94 helices in PDB entry 4D09. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
579 588Right-handed alpha
Helix 2
2
A
592 597Right-handed alpha
Helix 3
3
A
606 610Right-handed 310
Helix 4
4
A
611 613Right-handed 310
Helix 5
5
A
614 626Right-handed alpha
Helix 6
6
A
627 632Right-handed alpha
Helix 7
7
A
635 648Right-handed alpha
Helix 8
8
A
657 676Right-handed alpha
Helix 9
9
A
677 680Right-handed 310
Helix 10
10
A
682 696Right-handed alpha
Helix 11
11
A
704 711Right-handed alpha
Helix 12
12
A
713 720Right-handed alpha
Helix 13
13
A
724 739Right-handed alpha
Helix 14
14
A
750 767Right-handed alpha
Helix 15
15
A
769 787Right-handed alpha
Helix 16
16
A
792 809Right-handed alpha
Helix 17
17
A
810 814Right-handed 310
Helix 18
18
A
815 840Right-handed alpha
Helix 19
19
A
845 849Right-handed 310
Helix 20
20
A
854 866Right-handed alpha
Helix 21
21
A
866 878Right-handed alpha
Helix 22
22
A
881 899Right-handed alpha
Helix 23
23
A
900 903Right-handed 310
Helix 24
24
A
913 917Right-handed 310
Helix 25
25
B
580 588Right-handed alpha
Helix 26
26
B
592 597Right-handed alpha
Helix 27
27
B
606 610Right-handed 310
Helix 28
28
B
611 613Right-handed 310
Helix 29
29
B
614 626Right-handed alpha
Helix 30
30
B
627 632Right-handed alpha
Helix 31
31
B
635 649Right-handed alpha
Helix 32
32
B
657 676Right-handed alpha
Helix 33
33
B
677 680Right-handed 310
Helix 34
34
B
682 696Right-handed alpha
Helix 35
35
B
704 711Right-handed alpha
Helix 36
36
B
713 719Right-handed alpha
Helix 37
37
B
724 739Right-handed alpha
Helix 38
38
B
750 767Right-handed alpha
Helix 39
39
B
769 787Right-handed alpha
Helix 40
40
B
792 809Right-handed alpha
Helix 41
41
B
810 814Right-handed 310
Helix 42
42
B
815 840Right-handed alpha
Helix 43
43
B
845 849Right-handed 310
Helix 44
44
B
854 866Right-handed alpha
Helix 45
45
B
866 878Right-handed alpha
Helix 46
46
B
881 900Right-handed alpha
Helix 47
47
B
901 903Right-handed 310
Helix 48
48
C
592 597Right-handed alpha
Helix 49
49
C
606 610Right-handed 310
Helix 50
50
C
611 613Right-handed 310
Helix 51
51
C
614 627Right-handed alpha
Helix 52
52
C
627 632Right-handed alpha
Helix 53
53
C
635 650Right-handed alpha
Helix 54
54
C
657 676Right-handed alpha
Helix 55
55
C
677 680Right-handed 310
Helix 56
56
C
682 696Right-handed alpha
Helix 57
57
C
704 712Right-handed alpha
Helix 58
58
C
713 720Right-handed alpha
Helix 59
59
C
721 723Right-handed 310
Helix 60
60
C
724 740Right-handed alpha
Helix 61
61
C
750 767Right-handed alpha
Helix 62
62
C
769 776Right-handed alpha
Helix 63
63
C
776 786Right-handed alpha
Helix 64
64
C
792 809Right-handed alpha
Helix 65
65
C
810 814Right-handed 310
Helix 66
66
C
815 841Right-handed alpha
Helix 67
67
C
845 849Right-handed 310
Helix 68
68
C
854 866Right-handed alpha
Helix 69
69
C
866 878Right-handed alpha
Helix 70
70
C
881 898Right-handed alpha
Helix 71
71
C
899 903Right-handed 310
Helix 72
72
D
592 596Right-handed 310
Helix 73
73
D
606 610Right-handed 310
Helix 74
74
D
611 613Right-handed 310
Helix 75
75
D
614 626Right-handed alpha
Helix 76
76
D
627 632Right-handed alpha
Helix 77
77
D
635 650Right-handed alpha
Helix 78
78
D
657 676Right-handed alpha
Helix 79
79
D
677 680Right-handed 310
Helix 80
80
D
682 696Right-handed alpha
Helix 81
81
D
704 712Right-handed alpha
Helix 82
82
D
713 720Right-handed alpha
Helix 83
83
D
724 739Right-handed alpha
Helix 84
84
D
750 767Right-handed alpha
Helix 85
85
D
769 776Right-handed alpha
Helix 86
86
D
776 787Right-handed alpha
Helix 87
87
D
792 809Right-handed alpha
Helix 88
88
D
810 814Right-handed 310
Helix 89
89
D
815 840Right-handed alpha
Helix 90
90
D
845 849Right-handed 310
Helix 91
91
D
854 866Right-handed alpha
Helix 92
92
D
866 878Right-handed alpha
Helix 93
93
D
881 898Right-handed alpha
Helix 94
94
D
899 903Right-handed 310
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There are no sheets in PDB entry 4D09
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