Analysis of interatomic Contacts of Structural Units in PDB entry:
4D6K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4D6K entry

There are 6 chains in PDB entry 4D6K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 62LYS 147
B
 ASP 62SER 130
C
 ALA 64SER 130
D
 SER 59SER 130
E
 ASP 62ASP 131
F
 SER 66SER 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 4D6K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 88Right-handed alpha
Helix 2
2
A
89 104Right-handed alpha
Helix 3
3
A
109 126Right-handed alpha
Helix 4
4
A
127 130Right-handed 310
Helix 5
5
B
62 88Right-handed alpha
Helix 6
6
B
89 105Right-handed alpha
Helix 7
7
B
109 126Right-handed alpha
Helix 8
8
B
127 130Right-handed 310
Helix 9
9
C
65 88Right-handed alpha
Helix 10
10
C
89 105Right-handed alpha
Helix 11
11
C
109 126Right-handed alpha
Helix 12
12
C
127 130Right-handed 310
Helix 13
13
D
63 88Right-handed alpha
Helix 14
14
D
89 104Right-handed alpha
Helix 15
15
D
109 126Right-handed alpha
Helix 16
16
D
127 130Right-handed 310
Helix 17
17
E
62 88Right-handed alpha
Helix 18
18
E
89 104Right-handed alpha
Helix 19
19
E
109 126Right-handed alpha
Helix 20
20
E
127 130Right-handed 310
Helix 21
21
F
66 88Right-handed alpha
Helix 22
22
F
89 103Right-handed alpha
Helix 23
23
F
109 126Right-handed alpha
Helix 24
24
F
127 130Right-handed 310
Back to top of page
There are no sheets in PDB entry 4D6K
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il