Analysis of interatomic Contacts of Structural Units in PDB entry:
4D6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4D6V entry

There is 1 chain in PDB entry 4D6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2VAL 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 4D6V

There are 7 sheets in PDB entry 4D6V. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 11first strand
Strand 2
A
307 313anti-parallel
Strand 3
A
297 302anti-parallel
Strand 4
A
286 291anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 22first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
40 45anti-parallel
Strand 4
A
53 59anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 71first strand
Strand 2
A
77 82anti-parallel
Strand 3
A
87 91anti-parallel
Strand 4
A
96 101anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 113first strand
Strand 2
A
120 124anti-parallel
Strand 3
A
129 132anti-parallel
Strand 4
A
138 142anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 156first strand
Strand 2
A
164 169anti-parallel
Strand 3
A
174 178anti-parallel
Strand 4
A
183 188anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 200first strand
Strand 2
A
206 211anti-parallel
Strand 3
A
215 220anti-parallel
Strand 4
A
226 231anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 241first strand
Strand 2
A
247 252anti-parallel
Strand 3
A
256 260anti-parallel
Strand 4
A
265 270anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il