Analysis of interatomic Contacts of Structural Units in PDB entry:
4D7Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4D7Q entry

There is 1 chain in PDB entry 4D7Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ARG 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 4D7Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 8Right-handed alpha
Helix 2
2
A
8 19Right-handed alpha
Helix 3
3
A
19 35Right-handed alpha
Helix 4
4
A
37 49Right-handed alpha
Helix 5
5
A
50 53Right-handed 310
Helix 6
6
A
54 63Right-handed alpha
Helix 7
7
A
66 79Right-handed alpha
Helix 8
8
A
86 97Right-handed alpha
Helix 9
9
A
103 122Right-handed alpha
Helix 10
10
A
128 147Right-handed alpha
Helix 11
11
A
152 156Right-handed 310
Helix 12
12
A
158 166Right-handed alpha
Helix 13
13
A
176 190Right-handed alpha
Helix 14
14
A
213 225Right-handed alpha
Helix 15
15
A
233 237Right-handed 310
Helix 16
16
A
249 257Right-handed alpha
Helix 17
17
A
283 288Right-handed alpha
Helix 18
18
A
306 320Right-handed alpha
Helix 19
19
A
334 346Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 4D7Q.

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 246first strand
Strand 2
A
258 265anti-parallel
Strand 3
A
271 277anti-parallel
Strand 4
A
291 297anti-parallel
Strand 5
A
202 208anti-parallel
Strand 6
A
326 328anti-parallel
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