Analysis of interatomic Contacts of Structural Units in PDB entry:
4D8G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4D8G entry

There are 4 chains in PDB entry 4D8G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -7MET 318
B
 SER -9LEU 324
C
 VAL -5MET 318
D
 SER -1ASN 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 4D8G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 12Right-handed 310
Helix 2
2
A
14 18Right-handed 310
Helix 3
3
A
36 48Right-handed alpha
Helix 4
4
A
52 56Right-handed 310
Helix 5
5
A
58 67Right-handed alpha
Helix 6
6
A
71 99Right-handed alpha
Helix 7
7
A
99 104Right-handed alpha
Helix 8
8
A
106 135Right-handed alpha
Helix 9
9
A
137 143Right-handed alpha
Helix 10
10
A
143 148Right-handed alpha
Helix 11
11
A
148 163Right-handed alpha
Helix 12
12
A
174 190Right-handed alpha
Helix 13
13
A
195 210Right-handed alpha
Helix 14
14
A
213 245Right-handed alpha
Helix 15
15
A
246 249Right-handed 310
Helix 16
16
A
250 276Right-handed alpha
Helix 17
17
A
284 303Right-handed alpha
Helix 18
18
B
5 12Right-handed 310
Helix 19
19
B
14 18Right-handed 310
Helix 20
20
B
36 48Right-handed alpha
Helix 21
21
B
52 56Right-handed 310
Helix 22
22
B
58 67Right-handed alpha
Helix 23
23
B
71 99Right-handed alpha
Helix 24
24
B
100 104Right-handed 310
Helix 25
25
B
106 135Right-handed alpha
Helix 26
26
B
137 143Right-handed alpha
Helix 27
27
B
143 148Right-handed alpha
Helix 28
28
B
148 163Right-handed alpha
Helix 29
29
B
174 190Right-handed alpha
Helix 30
30
B
197 210Right-handed alpha
Helix 31
31
B
213 245Right-handed alpha
Helix 32
32
B
246 249Right-handed 310
Helix 33
33
B
250 276Right-handed alpha
Helix 34
34
B
284 303Right-handed alpha
Helix 35
35
B
315 320Right-handed 310
Helix 36
36
C
7 12Right-handed 310
Helix 37
37
C
14 18Right-handed 310
Helix 38
38
C
36 48Right-handed alpha
Helix 39
39
C
52 56Right-handed 310
Helix 40
40
C
58 67Right-handed alpha
Helix 41
41
C
71 99Right-handed alpha
Helix 42
42
C
99 104Right-handed alpha
Helix 43
43
C
106 134Right-handed alpha
Helix 44
44
C
137 143Right-handed alpha
Helix 45
45
C
143 148Right-handed alpha
Helix 46
46
C
148 163Right-handed alpha
Helix 47
47
C
164 167Right-handed 310
Helix 48
48
C
174 190Right-handed alpha
Helix 49
49
C
195 209Right-handed alpha
Helix 50
50
C
213 245Right-handed alpha
Helix 51
51
C
246 249Right-handed 310
Helix 52
52
C
250 276Right-handed alpha
Helix 53
53
C
284 303Right-handed alpha
Helix 54
54
D
5 12Right-handed 310
Helix 55
55
D
14 18Right-handed 310
Helix 56
56
D
36 48Right-handed alpha
Helix 57
57
D
52 56Right-handed 310
Helix 58
58
D
58 67Right-handed alpha
Helix 59
59
D
71 99Right-handed alpha
Helix 60
60
D
99 104Right-handed alpha
Helix 61
61
D
106 135Right-handed alpha
Helix 62
62
D
137 143Right-handed alpha
Helix 63
63
D
143 148Right-handed alpha
Helix 64
64
D
148 162Right-handed alpha
Helix 65
65
D
174 190Right-handed alpha
Helix 66
66
D
197 210Right-handed alpha
Helix 67
67
D
213 245Right-handed alpha
Helix 68
68
D
246 249Right-handed 310
Helix 69
69
D
250 276Right-handed alpha
Helix 70
70
D
284 303Right-handed alpha
Helix 71
71
D
315 325Right-handed alpha
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There are no sheets in PDB entry 4D8G
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