Analysis of interatomic Contacts of Structural Units in PDB entry:
4DA4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DA4 entry

There are 10 chains in PDB entry 4DA4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 732SER 1600
B
 ASP 732SER 1600
C
 G 1 C 5
C
 G 7 C 12
D
 G 13 G 17
D
 G 19 C 24
E
 G 1 C 5
E
 G 7 C 12
F
 G 13 G 17
F
 G 19 C 24
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 4DA4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
804 806Right-handed 310
Helix 2
2
A
808 812Right-handed 310
Helix 3
3
A
845 849Right-handed 310
Helix 4
4
A
897 911Right-handed alpha
Helix 5
5
A
946 950Right-handed 310
Helix 6
6
A
975 980Right-handed 310
Helix 7
7
A
1026 1030Right-handed 310
Helix 8
8
A
1057 1059Right-handed 310
Helix 9
9
A
1069 1071Right-handed 310
Helix 10
10
A
1074 1080Right-handed alpha
Helix 11
11
A
1103 1107Right-handed 310
Helix 12
12
A
1152 1161Right-handed alpha
Helix 13
13
A
1173 1184Right-handed alpha
Helix 14
14
A
1193 1203Right-handed alpha
Helix 15
15
A
1241 1262Right-handed alpha
Helix 16
16
A
1273 1275Right-handed 310
Helix 17
17
A
1276 1294Right-handed alpha
Helix 18
18
A
1305 1308Right-handed 310
Helix 19
19
A
1338 1343Right-handed 310
Helix 20
20
A
1369 1375Right-handed alpha
Helix 21
21
A
1397 1405Right-handed alpha
Helix 22
22
A
1421 1431Right-handed alpha
Helix 23
23
A
1438 1442Right-handed 310
Helix 24
24
A
1479 1484Right-handed 310
Helix 25
25
A
1500 1506Right-handed alpha
Helix 26
26
A
1507 1513Right-handed 310
Helix 27
27
A
1551 1559Right-handed alpha
Helix 28
28
A
1570 1581Right-handed alpha
Helix 29
29
A
1583 1599Right-handed alpha
Helix 30
30
B
804 806Right-handed 310
Helix 31
31
B
808 812Right-handed 310
Helix 32
32
B
845 849Right-handed 310
Helix 33
33
B
897 911Right-handed alpha
Helix 34
34
B
946 950Right-handed 310
Helix 35
35
B
975 980Right-handed 310
Helix 36
36
B
1026 1030Right-handed 310
Helix 37
37
B
1057 1059Right-handed 310
Helix 38
38
B
1069 1071Right-handed 310
Helix 39
39
B
1074 1081Right-handed alpha
Helix 40
40
B
1103 1107Right-handed 310
Helix 41
41
B
1152 1161Right-handed alpha
Helix 42
42
B
1173 1184Right-handed alpha
Helix 43
43
B
1193 1203Right-handed alpha
Helix 44
44
B
1241 1262Right-handed alpha
Helix 45
45
B
1273 1275Right-handed 310
Helix 46
46
B
1276 1294Right-handed alpha
Helix 47
47
B
1305 1308Right-handed 310
Helix 48
48
B
1338 1342Right-handed 310
Helix 49
49
B
1369 1375Right-handed alpha
Helix 50
50
B
1397 1405Right-handed alpha
Helix 51
51
B
1421 1430Right-handed alpha
Helix 52
52
B
1438 1442Right-handed 310
Helix 53
53
B
1479 1484Right-handed 310
Helix 54
54
B
1500 1506Right-handed alpha
Helix 55
55
B
1507 1513Right-handed 310
Helix 56
56
B
1551 1559Right-handed alpha
Helix 57
57
B
1570 1581Right-handed alpha
Helix 58
58
B
1583 1599Right-handed alpha
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There are no sheets in PDB entry 4DA4
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