Analysis of interatomic Contacts of Structural Units in PDB entry:
4DB9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DB9 entry

There are 6 chains in PDB entry 4DB9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 5GLN 207
B
 HIS 5GLN 207
C
 HIS 5GLN 207
D
 HIS 5GLN 207
E
 HIS 5GLN 207
F
 HIS 5GLN 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 4DB9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 11Right-handed 310
Helix 2
2
A
12 19Right-handed alpha
Helix 3
3
A
20 22Right-handed 310
Helix 4
4
A
24 40Right-handed alpha
Helix 5
5
A
42 52Right-handed alpha
Helix 6
6
A
53 61Right-handed alpha
Helix 7
7
A
62 64Right-handed 310
Helix 8
8
A
66 81Right-handed alpha
Helix 9
9
A
84 94Right-handed alpha
Helix 10
10
A
95 104Right-handed alpha
Helix 11
11
A
108 123Right-handed alpha
Helix 12
12
A
126 136Right-handed alpha
Helix 13
13
A
137 146Right-handed alpha
Helix 14
14
A
150 166Right-handed alpha
Helix 15
15
A
168 178Right-handed alpha
Helix 16
16
A
179 188Right-handed alpha
Helix 17
17
A
192 206Right-handed alpha
Helix 18
18
B
9 11Right-handed 310
Helix 19
19
B
12 19Right-handed alpha
Helix 20
20
B
20 22Right-handed 310
Helix 21
21
B
24 40Right-handed alpha
Helix 22
22
B
42 52Right-handed alpha
Helix 23
23
B
54 62Right-handed alpha
Helix 24
24
B
66 81Right-handed alpha
Helix 25
25
B
84 94Right-handed alpha
Helix 26
26
B
95 104Right-handed alpha
Helix 27
27
B
108 123Right-handed alpha
Helix 28
28
B
126 136Right-handed alpha
Helix 29
29
B
137 146Right-handed alpha
Helix 30
30
B
150 165Right-handed alpha
Helix 31
31
B
168 178Right-handed alpha
Helix 32
32
B
179 188Right-handed alpha
Helix 33
33
B
192 206Right-handed alpha
Helix 34
34
C
9 11Right-handed 310
Helix 35
35
C
12 20Right-handed alpha
Helix 36
36
C
24 40Right-handed alpha
Helix 37
37
C
41 52Right-handed alpha
Helix 38
38
C
54 62Right-handed alpha
Helix 39
39
C
66 81Right-handed alpha
Helix 40
40
C
84 94Right-handed alpha
Helix 41
41
C
95 104Right-handed alpha
Helix 42
42
C
108 123Right-handed alpha
Helix 43
43
C
126 136Right-handed alpha
Helix 44
44
C
137 146Right-handed alpha
Helix 45
45
C
150 166Right-handed alpha
Helix 46
46
C
168 178Right-handed alpha
Helix 47
47
C
179 188Right-handed alpha
Helix 48
48
C
192 206Right-handed alpha
Helix 49
49
D
9 11Right-handed 310
Helix 50
50
D
12 20Right-handed alpha
Helix 51
51
D
24 40Right-handed alpha
Helix 52
52
D
42 52Right-handed alpha
Helix 53
53
D
53 62Right-handed alpha
Helix 54
54
D
66 81Right-handed alpha
Helix 55
55
D
84 94Right-handed alpha
Helix 56
56
D
95 104Right-handed alpha
Helix 57
57
D
108 123Right-handed alpha
Helix 58
58
D
126 136Right-handed alpha
Helix 59
59
D
137 146Right-handed alpha
Helix 60
60
D
150 166Right-handed alpha
Helix 61
61
D
168 178Right-handed alpha
Helix 62
62
D
179 188Right-handed alpha
Helix 63
63
D
192 206Right-handed alpha
Helix 64
64
E
9 11Right-handed 310
Helix 65
65
E
12 20Right-handed alpha
Helix 66
66
E
24 40Right-handed alpha
Helix 67
67
E
42 52Right-handed alpha
Helix 68
68
E
54 62Right-handed alpha
Helix 69
69
E
66 81Right-handed alpha
Helix 70
70
E
84 94Right-handed alpha
Helix 71
71
E
95 104Right-handed alpha
Helix 72
72
E
108 123Right-handed alpha
Helix 73
73
E
126 136Right-handed alpha
Helix 74
74
E
137 146Right-handed alpha
Helix 75
75
E
150 166Right-handed alpha
Helix 76
76
E
168 178Right-handed alpha
Helix 77
77
E
179 188Right-handed alpha
Helix 78
78
E
192 206Right-handed alpha
Helix 79
79
F
9 11Right-handed 310
Helix 80
80
F
12 20Right-handed alpha
Helix 81
81
F
24 40Right-handed alpha
Helix 82
82
F
42 52Right-handed alpha
Helix 83
83
F
53 62Right-handed alpha
Helix 84
84
F
66 81Right-handed alpha
Helix 85
85
F
84 94Right-handed alpha
Helix 86
86
F
95 104Right-handed alpha
Helix 87
87
F
108 123Right-handed alpha
Helix 88
88
F
126 136Right-handed alpha
Helix 89
89
F
137 146Right-handed alpha
Helix 90
90
F
150 166Right-handed alpha
Helix 91
91
F
168 178Right-handed alpha
Helix 92
92
F
179 186Right-handed alpha
Helix 93
93
F
192 206Right-handed alpha
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There are no sheets in PDB entry 4DB9
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