Analysis of interatomic Contacts of Structural Units in PDB entry:
4DBA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DBA entry

There are 4 chains in PDB entry 4DBA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 12GLN 207
B
 GLU 12GLN 207
C
 GLU 12GLN 207
D
 GLU 12GLN 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 4DBA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 20Right-handed alpha
Helix 2
2
A
24 51Right-handed alpha
Helix 3
3
A
53 61Right-handed alpha
Helix 4
4
A
62 64Right-handed 310
Helix 5
5
A
66 81Right-handed alpha
Helix 6
6
A
84 94Right-handed alpha
Helix 7
7
A
95 105Right-handed alpha
Helix 8
8
A
108 123Right-handed alpha
Helix 9
9
A
126 137Right-handed alpha
Helix 10
10
A
137 145Right-handed alpha
Helix 11
11
A
150 165Right-handed alpha
Helix 12
12
A
168 177Right-handed alpha
Helix 13
13
A
179 186Right-handed alpha
Helix 14
14
A
187 189Right-handed 310
Helix 15
15
A
192 207Right-handed alpha
Helix 16
16
B
13 20Right-handed alpha
Helix 17
17
B
24 51Right-handed alpha
Helix 18
18
B
53 61Right-handed alpha
Helix 19
19
B
62 64Right-handed 310
Helix 20
20
B
66 81Right-handed alpha
Helix 21
21
B
84 94Right-handed alpha
Helix 22
22
B
95 103Right-handed alpha
Helix 23
23
B
104 106Right-handed 310
Helix 24
24
B
108 123Right-handed alpha
Helix 25
25
B
126 136Right-handed alpha
Helix 26
26
B
137 148Right-handed alpha
Helix 27
27
B
150 166Right-handed alpha
Helix 28
28
B
168 178Right-handed alpha
Helix 29
29
B
179 186Right-handed alpha
Helix 30
30
B
192 207Right-handed alpha
Helix 31
31
C
13 20Right-handed alpha
Helix 32
32
C
24 51Right-handed alpha
Helix 33
33
C
53 61Right-handed alpha
Helix 34
34
C
62 64Right-handed 310
Helix 35
35
C
66 81Right-handed alpha
Helix 36
36
C
84 94Right-handed alpha
Helix 37
37
C
95 103Right-handed alpha
Helix 38
38
C
104 106Right-handed 310
Helix 39
39
C
108 123Right-handed alpha
Helix 40
40
C
126 136Right-handed alpha
Helix 41
41
C
137 145Right-handed alpha
Helix 42
42
C
146 148Right-handed 310
Helix 43
43
C
150 166Right-handed alpha
Helix 44
44
C
168 177Right-handed alpha
Helix 45
45
C
179 186Right-handed alpha
Helix 46
46
C
187 190Right-handed 310
Helix 47
47
C
192 207Right-handed alpha
Helix 48
48
D
13 20Right-handed alpha
Helix 49
49
D
24 51Right-handed alpha
Helix 50
50
D
53 61Right-handed alpha
Helix 51
51
D
62 64Right-handed 310
Helix 52
52
D
66 81Right-handed alpha
Helix 53
53
D
84 94Right-handed alpha
Helix 54
54
D
95 104Right-handed alpha
Helix 55
55
D
108 123Right-handed alpha
Helix 56
56
D
126 136Right-handed alpha
Helix 57
57
D
137 145Right-handed alpha
Helix 58
58
D
150 166Right-handed alpha
Helix 59
59
D
168 177Right-handed alpha
Helix 60
60
D
179 187Right-handed alpha
Helix 61
61
D
192 207Right-handed alpha
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There are no sheets in PDB entry 4DBA
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