Analysis of interatomic Contacts of Structural Units in PDB entry:
4DCI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DCI entry

There are 8 chains in PDB entry 4DCI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0GLU 146
B
 ASN -1GLU 146
C
 ASN -1GLU 146
D
 SER 2GLU 146
E
 ALA 0GLU 146
F
 ALA 0GLU 146
G
 THR 5ALA 147
H
 ALA -1GLU 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 4DCI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 59Right-handed alpha
Helix 2
2
A
65 103Right-handed alpha
Helix 3
3
A
125 130Right-handed alpha
Helix 4
4
B
20 58Right-handed alpha
Helix 5
5
B
65 102Right-handed alpha
Helix 6
6
B
125 130Right-handed alpha
Helix 7
7
C
20 59Right-handed alpha
Helix 8
8
C
65 102Right-handed alpha
Helix 9
9
C
125 131Right-handed alpha
Helix 10
10
D
20 58Right-handed alpha
Helix 11
11
D
65 103Right-handed alpha
Helix 12
12
D
125 130Right-handed alpha
Helix 13
13
E
20 58Right-handed alpha
Helix 14
14
E
65 102Right-handed alpha
Helix 15
15
E
125 130Right-handed alpha
Helix 16
16
F
20 44Right-handed alpha
Helix 17
17
F
44 59Right-handed alpha
Helix 18
18
F
65 103Right-handed alpha
Helix 19
19
F
125 130Right-handed alpha
Helix 20
20
G
20 58Right-handed alpha
Helix 21
21
G
65 103Right-handed alpha
Helix 22
22
G
125 130Right-handed alpha
Helix 23
23
H
20 57Right-handed alpha
Helix 24
24
H
67 103Right-handed alpha
Helix 25
25
H
125 129Right-handed 310
Back to top of page
There are no sheets in PDB entry 4DCI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il