Analysis of interatomic Contacts of Structural Units in PDB entry:
4DHX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DHX entry

There are 6 chains in PDB entry 4DHX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1162GLN 1233
B
 ASP 9ALA 99
C
 ASN 7ALA 99
D
 GLU 1166GLU 1234
E
 ASP 9SER 100
F
 ASP 9ALA 99
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4DHX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1166 1232Right-handed alpha
Helix 2
2
B
10 23Right-handed alpha
Helix 3
3
B
24 40Right-handed alpha
Helix 4
4
B
41 58Right-handed alpha
Helix 5
5
B
63 79Right-handed alpha
Helix 6
6
B
80 99Right-handed alpha
Helix 7
7
C
8 23Right-handed alpha
Helix 8
8
C
24 40Right-handed alpha
Helix 9
9
C
41 58Right-handed alpha
Helix 10
10
C
63 78Right-handed alpha
Helix 11
11
C
80 97Right-handed alpha
Helix 12
12
D
1167 1234Right-handed alpha
Helix 13
13
E
10 24Right-handed alpha
Helix 14
14
E
24 40Right-handed alpha
Helix 15
15
E
41 58Right-handed alpha
Helix 16
16
E
63 78Right-handed alpha
Helix 17
17
E
80 99Right-handed alpha
Helix 18
18
F
10 24Right-handed alpha
Helix 19
19
F
24 40Right-handed alpha
Helix 20
20
F
41 58Right-handed alpha
Helix 21
21
F
59 62Right-handed 310
Helix 22
22
F
63 78Right-handed alpha
Helix 23
23
F
80 97Right-handed alpha
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There are no sheets in PDB entry 4DHX
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il