Analysis of interatomic Contacts of Structural Units in PDB entry:
4DJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DJS entry

There are 4 chains in PDB entry 4DJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 148ASP 665
B
 ARG 2GLN 5
B
 ILE 7ASP 9
B
 HIS 11TRP 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4DJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
148 151Right-handed 310
Helix 2
2
A
152 162Right-handed alpha
Helix 3
3
A
166 178Right-handed alpha
Helix 4
4
A
181 189Right-handed alpha
Helix 5
5
A
191 205Right-handed alpha
Helix 6
6
A
207 222Right-handed alpha
Helix 7
7
A
224 234Right-handed alpha
Helix 8
8
A
235 244Right-handed alpha
Helix 9
9
A
248 266Right-handed alpha
Helix 10
10
A
268 276Right-handed alpha
Helix 11
11
A
277 285Right-handed alpha
Helix 12
12
A
286 288Right-handed 310
Helix 13
13
A
290 306Right-handed alpha
Helix 14
14
A
308 318Right-handed alpha
Helix 15
15
A
319 329Right-handed alpha
Helix 16
16
A
333 349Right-handed alpha
Helix 17
17
A
352 360Right-handed alpha
Helix 18
18
A
361 367Right-handed alpha
Helix 19
19
A
368 370Right-handed 310
Helix 20
20
A
374 389Right-handed alpha
Helix 21
21
A
398 409Right-handed alpha
Helix 22
22
A
413 428Right-handed alpha
Helix 23
23
A
431 441Right-handed alpha
Helix 24
24
A
442 455Right-handed alpha
Helix 25
25
A
457 472Right-handed alpha
Helix 26
26
A
477 488Right-handed alpha
Helix 27
27
A
490 497Right-handed alpha
Helix 28
28
A
503 519Right-handed alpha
Helix 29
29
A
520 522Right-handed 310
Helix 30
30
A
523 530Right-handed alpha
Helix 31
31
A
533 549Right-handed alpha
Helix 32
32
A
565 580Right-handed alpha
Helix 33
33
A
583 592Right-handed alpha
Helix 34
34
A
595 602Right-handed alpha
Helix 35
35
A
603 605Right-handed 310
Helix 36
36
A
607 623Right-handed alpha
Helix 37
37
A
625 635Right-handed alpha
Helix 38
38
A
638 643Right-handed alpha
Helix 39
39
A
650 664Right-handed alpha
Helix 40
40
B
5 16Right-handed alpha
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There are no sheets in PDB entry 4DJS
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il