Analysis of interatomic Contacts of Structural Units in PDB entry:
4DOJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DOJ entry

There are 3 chains in PDB entry 4DOJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 57ARG 583
B
 SER 57ARG 558
C
 SER 57THR 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 87 helices in PDB entry 4DOJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
63 79Right-handed alpha
Helix 2
2
A
81 88Right-handed 310
Helix 3
3
A
91 95Right-handed 310
Helix 4
4
A
99 120Right-handed alpha
Helix 5
5
A
121 125Right-handed 310
Helix 6
6
A
139 149Right-handed alpha
Helix 7
7
A
151 155Right-handed 310
Helix 8
8
A
160 169Right-handed alpha
Helix 9
9
A
177 190Right-handed alpha
Helix 10
10
A
190 210Right-handed alpha
Helix 11
11
A
216 220Right-handed 310
Helix 12
12
A
221 226Right-handed alpha
Helix 13
13
A
235 263Right-handed alpha
Helix 14
14
A
264 268Right-handed 310
Helix 15
15
A
276 278Right-handed 310
Helix 16
16
A
279 287Right-handed alpha
Helix 17
17
A
305 324Right-handed alpha
Helix 18
18
A
325 348Right-handed alpha
Helix 19
19
A
359 364Right-handed alpha
Helix 20
20
A
366 387Right-handed alpha
Helix 21
21
A
393 402Right-handed alpha
Helix 22
22
A
402 423Right-handed alpha
Helix 23
23
A
435 443Right-handed alpha
Helix 24
24
A
449 460Right-handed alpha
Helix 25
25
A
460 479Right-handed alpha
Helix 26
26
A
488 498Right-handed alpha
Helix 27
27
A
518 526Right-handed alpha
Helix 28
28
A
528 545Right-handed alpha
Helix 29
29
A
547 572Right-handed alpha
Helix 30
30
A
578 582Right-handed 310
Helix 31
31
B
62 76Right-handed alpha
Helix 32
32
B
91 99Right-handed alpha
Helix 33
33
B
99 120Right-handed alpha
Helix 34
34
B
121 124Right-handed 310
Helix 35
35
B
138 148Right-handed alpha
Helix 36
36
B
156 169Right-handed alpha
Helix 37
37
B
177 189Right-handed alpha
Helix 38
38
B
194 210Right-handed alpha
Helix 39
39
B
216 222Right-handed 310
Helix 40
40
B
232 268Right-handed alpha
Helix 41
41
B
279 291Right-handed alpha
Helix 42
42
B
291 296Right-handed alpha
Helix 43
43
B
297 299Right-handed 310
Helix 44
44
B
300 324Right-handed alpha
Helix 45
45
B
325 343Right-handed alpha
Helix 46
46
B
359 366Right-handed alpha
Helix 47
47
B
366 388Right-handed alpha
Helix 48
48
B
394 399Right-handed alpha
Helix 49
49
B
402 427Right-handed alpha
Helix 50
50
B
431 434Right-handed 310
Helix 51
51
B
435 446Right-handed alpha
Helix 52
52
B
449 463Right-handed alpha
Helix 53
53
B
464 481Right-handed alpha
Helix 54
54
B
488 497Right-handed alpha
Helix 55
55
B
499 504Right-handed alpha
Helix 56
56
B
515 525Right-handed alpha
Helix 57
57
B
527 529Right-handed 310
Helix 58
58
B
530 539Right-handed alpha
Helix 59
59
B
540 545Right-handed alpha
Helix 60
60
B
547 555Right-handed alpha
Helix 61
61
C
59 78Right-handed alpha
Helix 62
62
C
84 89Right-handed alpha
Helix 63
63
C
90 99Right-handed alpha
Helix 64
64
C
99 120Right-handed alpha
Helix 65
65
C
121 125Right-handed 310
Helix 66
66
C
137 146Right-handed alpha
Helix 67
67
C
151 169Right-handed alpha
Helix 68
68
C
177 190Right-handed alpha
Helix 69
69
C
190 210Right-handed alpha
Helix 70
70
C
216 221Right-handed 310
Helix 71
71
C
235 263Right-handed alpha
Helix 72
72
C
264 268Right-handed 310
Helix 73
73
C
276 293Right-handed alpha
Helix 74
74
C
301 324Right-handed alpha
Helix 75
75
C
325 349Right-handed alpha
Helix 76
76
C
358 366Right-handed alpha
Helix 77
77
C
366 376Right-handed alpha
Helix 78
78
C
377 390Right-handed alpha
Helix 79
79
C
393 427Right-handed alpha
Helix 80
80
C
431 434Right-handed 310
Helix 81
81
C
435 446Right-handed alpha
Helix 82
82
C
449 479Right-handed alpha
Helix 83
83
C
488 509Right-handed alpha
Helix 84
84
C
510 512Right-handed 310
Helix 85
85
C
513 546Right-handed alpha
Helix 86
86
C
547 558Right-handed alpha
Helix 87
87
C
558 563Right-handed alpha
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There are no sheets in PDB entry 4DOJ
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