Analysis of interatomic Contacts of Structural Units in PDB entry:
4DOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DOL entry

There is 1 chain in PDB entry 4DOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 11VAL 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 4DOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 74Right-handed 310
Helix 2
2
A
77 83Right-handed alpha
Helix 3
3
A
84 94Right-handed alpha
Helix 4
4
A
109 122Right-handed alpha
Helix 5
5
A
129 144Right-handed alpha
Helix 6
6
A
183 196Right-handed alpha
Helix 7
7
A
201 216Right-handed alpha
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There are 2 sheets in PDB entry 4DOL. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
22 24anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
36 47anti-parallel
Strand 3
A
52 62anti-parallel
Strand 4
A
98 104anti-parallel
Strand 5
A
153 160anti-parallel
Strand 6
A
163 169anti-parallel
Strand 7
A
179 182anti-parallel
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