Analysis of interatomic Contacts of Structural Units in PDB entry:
4DOZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DOZ entry

There is 1 chain in PDB entry 4DOZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 205PRO 871
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 4DOZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
206 216Right-handed alpha
Helix 2
2
A
229 235Right-handed alpha
Helix 3
3
A
238 264Right-handed alpha
Helix 4
4
A
265 267Right-handed 310
Helix 5
5
A
277 284Right-handed alpha
Helix 6
6
A
290 295Right-handed 310
Helix 7
7
A
309 340Right-handed alpha
Helix 8
8
A
351 355Right-handed 310
Helix 9
9
A
357 366Right-handed alpha
Helix 10
10
A
418 432Right-handed alpha
Helix 11
11
A
457 462Right-handed alpha
Helix 12
12
A
463 471Right-handed alpha
Helix 13
13
A
478 495Right-handed alpha
Helix 14
14
A
503 509Right-handed alpha
Helix 15
15
A
510 512Right-handed 310
Helix 16
16
A
513 522Right-handed alpha
Helix 17
17
A
523 532Right-handed alpha
Helix 18
18
A
545 549Right-handed 310
Helix 19
19
A
550 557Right-handed alpha
Helix 20
20
A
569 588Right-handed alpha
Helix 21
21
A
604 609Right-handed alpha
Helix 22
22
A
639 655Right-handed alpha
Helix 23
23
A
655 662Right-handed alpha
Helix 24
24
A
683 698Right-handed alpha
Helix 25
25
A
722 736Right-handed alpha
Helix 26
26
A
737 741Right-handed 310
Helix 27
27
A
765 773Right-handed alpha
Helix 28
28
A
774 780Right-handed alpha
Helix 29
29
A
787 799Right-handed alpha
Helix 30
30
A
806 816Right-handed alpha
Helix 31
31
A
825 843Right-handed alpha
Helix 32
32
A
849 866Right-handed alpha
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There are 2 sheets in PDB entry 4DOZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 271first strand
Strand 2
A
302 307anti-parallel
Strand 3
A
219 224anti-parallel
Strand 4
A
371 374anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 670first strand
Strand 2
A
674 680anti-parallel
Strand 3
A
593 601anti-parallel
Strand 4
A
710 718anti-parallel
Strand 5
A
746 752parallel
Strand 6
A
758 764anti-parallel
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