Analysis of interatomic Contacts of Structural Units in PDB entry:
4DT5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DT5 entry

There are 2 chains in PDB entry 4DT5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1HIS 143
B
 GLY 1HIS 138
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 4DT5

There are 4 sheets in PDB entry 4DT5. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 7first strand
Strand 2
A
31 36anti-parallel
Strand 3
A
51 59parallel
Strand 4
A
71 79parallel
Strand 5
A
95 101parallel
Strand 6
A
120 126parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 18first strand
Strand 2
A
21 26anti-parallel
Strand 3
A
41 47parallel
Strand 4
A
62 69parallel
Strand 5
A
82 90parallel
Strand 6
A
129 137parallel
Strand 7
A
109 117parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 7first strand
Strand 2
B
31 36anti-parallel
Strand 3
B
51 57parallel
Strand 4
B
71 77parallel
Strand 5
B
94 101parallel
Strand 6
B
119 126parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 18first strand
Strand 2
B
21 26anti-parallel
Strand 3
B
41 47parallel
Strand 4
B
62 69parallel
Strand 5
B
82 89parallel
Strand 6
B
129 137parallel
Strand 7
B
109 117parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il