Analysis of interatomic Contacts of Structural Units in PDB entry:
4DTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DTE entry

There are 2 chains in PDB entry 4DTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 1TYR 374
B
 ASN 1GLN 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4DTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 22Right-handed alpha
Helix 2
2
A
30 45Right-handed alpha
Helix 3
3
A
46 58Right-handed alpha
Helix 4
4
A
65 79Right-handed alpha
Helix 5
5
A
98 110Right-handed alpha
Helix 6
6
A
120 135Right-handed alpha
Helix 7
7
A
172 176Right-handed 310
Helix 8
8
A
238 246Right-handed 310
Helix 9
9
A
247 258Right-handed alpha
Helix 10
10
A
278 285Right-handed alpha
Helix 11
11
A
287 292Right-handed 310
Helix 12
12
B
2 22Right-handed alpha
Helix 13
13
B
30 45Right-handed alpha
Helix 14
14
B
46 58Right-handed alpha
Helix 15
15
B
65 79Right-handed alpha
Helix 16
16
B
98 110Right-handed alpha
Helix 17
17
B
120 136Right-handed alpha
Helix 18
18
B
172 176Right-handed 310
Helix 19
19
B
238 243Right-handed 310
Helix 20
20
B
247 258Right-handed alpha
Helix 21
21
B
278 285Right-handed alpha
Helix 22
22
B
287 292Right-handed 310
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There are 6 sheets in PDB entry 4DTE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
362 368anti-parallel
Strand 3
A
350 356anti-parallel
Strand 4
A
225 232anti-parallel
Strand 5
A
212 219anti-parallel
Strand 6
A
188 206anti-parallel
Strand 7
A
177 182anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
362 368anti-parallel
Strand 3
A
350 356anti-parallel
Strand 4
A
225 232anti-parallel
Strand 5
A
212 219anti-parallel
Strand 6
A
188 206anti-parallel
Strand 7
A
259 268anti-parallel
Strand 8
A
343 345parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 116first strand
Strand 2
A
83 92parallel
Strand 3
A
155 163anti-parallel
Strand 4
A
311 320parallel
Strand 5
A
270 277anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 29first strand
Strand 2
B
362 368anti-parallel
Strand 3
B
350 356anti-parallel
Strand 4
B
225 232anti-parallel
Strand 5
B
212 219anti-parallel
Strand 6
B
188 206anti-parallel
Strand 7
B
177 182anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 29first strand
Strand 2
B
362 368anti-parallel
Strand 3
B
350 356anti-parallel
Strand 4
B
225 232anti-parallel
Strand 5
B
212 219anti-parallel
Strand 6
B
188 206anti-parallel
Strand 7
B
259 268anti-parallel
Strand 8
B
342 345parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 116first strand
Strand 2
B
83 92parallel
Strand 3
B
155 163anti-parallel
Strand 4
B
311 320parallel
Strand 5
B
270 277anti-parallel
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