Analysis of interatomic Contacts of Structural Units in PDB entry:
4DVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DVE entry

There are 3 chains in PDB entry 4DVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0ARG 188
B
 ALA 0ARG 188
C
 MSE 1ARG 188
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4DVE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 24Right-handed alpha
Helix 2
2
A
41 71Right-handed alpha
Helix 3
3
A
82 87Right-handed 310
Helix 4
4
A
89 110Right-handed alpha
Helix 5
5
A
111 115Right-handed 310
Helix 6
6
A
117 130Right-handed alpha
Helix 7
7
A
130 146Right-handed alpha
Helix 8
8
A
148 156Right-handed alpha
Helix 9
9
A
159 180Right-handed alpha
Helix 10
10
A
183 188Right-handed 310
Helix 11
11
B
2 24Right-handed alpha
Helix 12
12
B
41 70Right-handed alpha
Helix 13
13
B
82 87Right-handed 310
Helix 14
14
B
89 110Right-handed alpha
Helix 15
15
B
117 130Right-handed alpha
Helix 16
16
B
130 145Right-handed alpha
Helix 17
17
B
148 156Right-handed alpha
Helix 18
18
B
159 180Right-handed alpha
Helix 19
19
B
181 188Right-handed 310
Helix 20
20
C
2 24Right-handed alpha
Helix 21
21
C
41 71Right-handed alpha
Helix 22
22
C
82 87Right-handed 310
Helix 23
23
C
89 110Right-handed alpha
Helix 24
24
C
117 130Right-handed alpha
Helix 25
25
C
130 146Right-handed alpha
Helix 26
26
C
148 157Right-handed alpha
Helix 27
27
C
159 180Right-handed alpha
Helix 28
28
C
183 188Right-handed 310
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There are no sheets in PDB entry 4DVE
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il