Analysis of interatomic Contacts of Structural Units in PDB entry:
4DZH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DZH entry

There is 1 chain in PDB entry 4DZH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 9VAL 447
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4DZH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 56Right-handed alpha
Helix 2
2
A
80 87Right-handed 310
Helix 3
3
A
94 102Right-handed alpha
Helix 4
4
A
102 111Right-handed alpha
Helix 5
5
A
112 130Right-handed alpha
Helix 6
6
A
141 152Right-handed alpha
Helix 7
7
A
172 188Right-handed alpha
Helix 8
8
A
206 221Right-handed alpha
Helix 9
9
A
231 243Right-handed alpha
Helix 10
10
A
245 254Right-handed alpha
Helix 11
11
A
269 280Right-handed alpha
Helix 12
12
A
286 293Right-handed alpha
Helix 13
13
A
299 306Right-handed alpha
Helix 14
14
A
324 341Right-handed alpha
Helix 15
15
A
347 356Right-handed alpha
Helix 16
16
A
356 363Right-handed alpha
Helix 17
17
A
387 391Right-handed 310
Helix 18
18
A
395 403Right-handed alpha
Helix 19
19
A
405 407Right-handed 310
Helix 20
20
A
429 447Right-handed alpha
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There are 3 sheets in PDB entry 4DZH. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 49first strand
Strand 2
A
32 40anti-parallel
Strand 3
A
11 22anti-parallel
Strand 4
A
57 72parallel
Strand 5
A
380 384anti-parallel
Strand 6
A
409 414anti-parallel
Strand 7
A
417 421anti-parallel
Strand 8
A
424 425anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
132 138parallel
Strand 3
A
155 162parallel
Strand 4
A
193 199parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 228first strand
Strand 2
A
260 264parallel
Strand 3
A
282 285parallel
Strand 4
A
309 312parallel
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