Analysis of interatomic Contacts of Structural Units in PDB entry:
4DZL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DZL entry

There are 24 chains in PDB entry 4DZL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1LYS 21
A
 GLU 23GLY 30
I
 GLY 1LYS 21
I
 GLU 23TYR 31
C
 GLY 1LYS 21
C
 GLU 23GLY 32
B
 GLY 1LYS 21
B
 GLU 23GLY 32
E
 GLU 2LYS 21
E
 GLU 23GLY 32
F
 GLY 1LYS 21
F
 GLU 23GLY 32
G
 GLU 2LYS 21
G
 GLU 23GLN 29
H
 GLY 1LYS 21
H
 GLU 23GLY 30
J
 GLY 1LYS 21
J
 GLU 23GLY 30
D
 ILE 3LYS 21
D
 GLU 23GLN 29
K
 GLY 1LYS 21
K
 GLU 23GLY 30
L
 ALA 5LYS 21
L
 GLU 23TYR 31
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4DZL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 29Right-handed alpha
Helix 2
2
I
1 30Right-handed alpha
Helix 3
3
C
1 29Right-handed alpha
Helix 4
4
B
1 29Right-handed alpha
Helix 5
5
E
3 29Right-handed alpha
Helix 6
6
F
1 30Right-handed alpha
Helix 7
7
G
3 29Right-handed alpha
Helix 8
8
H
1 30Right-handed alpha
Helix 9
9
J
1 30Right-handed alpha
Helix 10
10
D
4 29Right-handed alpha
Helix 11
11
K
2 30Right-handed alpha
Helix 12
12
L
6 29Right-handed alpha
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There are no sheets in PDB entry 4DZL
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il