Analysis of interatomic Contacts of Structural Units in PDB entry:
4DZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DZR entry

There is 1 chain in PDB entry 4DZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 99PRO 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4DZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
102 107Right-handed 310
Helix 2
2
A
109 124Right-handed alpha
Helix 3
3
A
140 150Right-handed alpha
Helix 4
4
A
182 196Right-handed alpha
Helix 5
5
A
238 246Right-handed alpha
Helix 6
6
A
248 252Right-handed 310
Helix 7
7
A
267 275Right-handed alpha
Helix 8
8
A
276 281Right-handed 310
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There are 2 sheets in PDB entry 4DZR. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 159first strand
Strand 2
A
130 136parallel
Strand 3
A
202 205parallel
Strand 4
A
257 262parallel
Strand 5
A
295 302anti-parallel
Strand 6
A
283 284anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 159first strand
Strand 2
A
130 136parallel
Strand 3
A
202 205parallel
Strand 4
A
257 262parallel
Strand 5
A
295 302anti-parallel
Strand 6
A
287 289anti-parallel
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