Analysis of interatomic Contacts of Structural Units in PDB entry:
4DZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4DZZ entry

There are 2 chains in PDB entry 4DZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 206
B
 MET 1GLU 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 4DZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 29Right-handed alpha
Helix 2
2
A
42 49Right-handed alpha
Helix 3
3
A
62 68Right-handed alpha
Helix 4
4
A
68 73Right-handed alpha
Helix 5
5
A
88 98Right-handed alpha
Helix 6
6
A
111 123Right-handed alpha
Helix 7
7
A
124 125Right-handed 310
Helix 8
8
A
126 130Right-handed 310
Helix 9
9
A
148 158Right-handed alpha
Helix 10
10
A
169 178Right-handed alpha
Helix 11
11
A
181 185Right-handed 310
Helix 12
12
A
187 206Right-handed alpha
Helix 13
13
B
14 29Right-handed alpha
Helix 14
14
B
42 48Right-handed alpha
Helix 15
15
B
49 51Right-handed 310
Helix 16
16
B
62 68Right-handed alpha
Helix 17
17
B
68 73Right-handed alpha
Helix 18
18
B
88 98Right-handed alpha
Helix 19
19
B
108 123Right-handed alpha
Helix 20
20
B
144 157Right-handed alpha
Helix 21
21
B
170 178Right-handed alpha
Helix 22
22
B
181 185Right-handed 310
Helix 23
23
B
189 206Right-handed alpha
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There are 2 sheets in PDB entry 4DZZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
33 37parallel
Strand 3
A
78 82parallel
Strand 4
A
2 6parallel
Strand 5
A
100 105parallel
Strand 6
A
132 137parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 147first strand
Strand 2
B
56 59anti-parallel
Strand 3
B
33 37parallel
Strand 4
B
78 82parallel
Strand 5
B
2 6parallel
Strand 6
B
100 105parallel
Strand 7
B
132 139parallel
Strand 8
B
166 167parallel
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