Analysis of interatomic Contacts of Structural Units in PDB entry:
4E09


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E09 entry

There is 1 chain in PDB entry 4E09 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4E09. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 28Right-handed alpha
Helix 2
2
A
42 51Right-handed alpha
Helix 3
3
A
62 67Right-handed alpha
Helix 4
4
A
90 98Right-handed alpha
Helix 5
5
A
115 124Right-handed alpha
Helix 6
6
A
143 156Right-handed alpha
Helix 7
7
A
170 179Right-handed alpha
Helix 8
8
A
187 204Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4E09.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
34 37parallel
Strand 3
A
78 82parallel
Strand 4
A
2 6parallel
Strand 5
A
100 105parallel
Strand 6
A
132 137parallel
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