Analysis of interatomic Contacts of Structural Units in PDB entry:
4E0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E0B entry

There are 4 chains in PDB entry 4E0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -1VAL 309
B
 ALA 0VAL 309
C
 ALA 0VAL 309
D
 ALA 0VAL 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 4E0B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 24Right-handed alpha
Helix 2
2
A
38 48Right-handed alpha
Helix 3
3
A
63 68Right-handed alpha
Helix 4
4
A
88 109Right-handed alpha
Helix 5
5
A
120 135Right-handed alpha
Helix 6
6
A
147 162Right-handed alpha
Helix 7
7
A
178 180Right-handed 310
Helix 8
8
A
186 189Right-handed 310
Helix 9
9
A
195 208Right-handed alpha
Helix 10
10
A
208 217Right-handed alpha
Helix 11
11
A
224 243Right-handed alpha
Helix 12
12
A
284 309Right-handed alpha
Helix 13
13
B
10 24Right-handed alpha
Helix 14
14
B
38 48Right-handed alpha
Helix 15
15
B
63 68Right-handed alpha
Helix 16
16
B
87 109Right-handed alpha
Helix 17
17
B
120 135Right-handed alpha
Helix 18
18
B
147 162Right-handed alpha
Helix 19
19
B
178 180Right-handed 310
Helix 20
20
B
186 189Right-handed 310
Helix 21
21
B
195 217Right-handed alpha
Helix 22
22
B
224 243Right-handed alpha
Helix 23
23
B
284 309Right-handed alpha
Helix 24
24
C
10 24Right-handed alpha
Helix 25
25
C
38 48Right-handed alpha
Helix 26
26
C
63 68Right-handed alpha
Helix 27
27
C
89 109Right-handed alpha
Helix 28
28
C
120 135Right-handed alpha
Helix 29
29
C
139 141Right-handed 310
Helix 30
30
C
147 163Right-handed alpha
Helix 31
31
C
178 180Right-handed 310
Helix 32
32
C
186 189Right-handed 310
Helix 33
33
C
195 208Right-handed alpha
Helix 34
34
C
208 217Right-handed alpha
Helix 35
35
C
224 243Right-handed alpha
Helix 36
36
C
284 309Right-handed alpha
Helix 37
37
D
10 24Right-handed alpha
Helix 38
38
D
38 48Right-handed alpha
Helix 39
39
D
63 68Right-handed alpha
Helix 40
40
D
87 109Right-handed alpha
Helix 41
41
D
120 135Right-handed alpha
Helix 42
42
D
147 163Right-handed alpha
Helix 43
43
D
178 180Right-handed 310
Helix 44
44
D
186 189Right-handed 310
Helix 45
45
D
195 217Right-handed alpha
Helix 46
46
D
224 243Right-handed alpha
Helix 47
47
D
284 309Right-handed alpha
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There are 12 sheets in PDB entry 4E0B. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 59first strand
Strand 2
A
29 34parallel
Strand 3
A
2 6parallel
Strand 4
A
72 75parallel
Strand 5
A
113 116parallel
Strand 6
A
143 145parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 175first strand
Strand 2
A
182 184anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 254first strand
Strand 2
A
262 270anti-parallel
Strand 3
A
273 277anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 58first strand
Strand 2
B
29 33parallel
Strand 3
B
2 6parallel
Strand 4
B
72 75parallel
Strand 5
B
113 116parallel
Strand 6
B
143 145parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 175first strand
Strand 2
B
182 184anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 253first strand
Strand 2
B
263 270anti-parallel
Strand 3
B
273 277anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 58first strand
Strand 2
C
29 33parallel
Strand 3
C
2 6parallel
Strand 4
C
72 75parallel
Strand 5
C
113 116parallel
Strand 6
C
143 145parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
173 175first strand
Strand 2
C
182 184anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
247 254first strand
Strand 2
C
262 270anti-parallel
Strand 3
C
273 277anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 58first strand
Strand 2
D
28 33parallel
Strand 3
D
2 6parallel
Strand 4
D
72 75parallel
Strand 5
D
113 116parallel
Strand 6
D
143 145parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
173 175first strand
Strand 2
D
182 184anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
247 254first strand
Strand 2
D
262 270anti-parallel
Strand 3
D
273 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il