Analysis of interatomic Contacts of Structural Units in PDB entry:
4E0T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E0T entry

There are 4 chains in PDB entry 4E0T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 33GLU 440
B
 PRO 33GLU 440
C
 PRO 33GLU 440
D
 PRO 33VAL 61
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 76 helices in PDB entry 4E0T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 45Right-handed alpha
Helix 2
2
A
51 72Right-handed alpha
Helix 3
3
A
75 90Right-handed alpha
Helix 4
4
A
91 94Right-handed 310
Helix 5
5
A
108 112Right-handed 310
Helix 6
6
A
136 141Right-handed 310
Helix 7
7
A
149 162Right-handed alpha
Helix 8
8
A
167 178Right-handed alpha
Helix 9
9
A
180 185Right-handed alpha
Helix 10
10
A
188 197Right-handed alpha
Helix 11
11
A
224 232Right-handed alpha
Helix 12
12
A
234 247Right-handed alpha
Helix 13
13
A
252 267Right-handed alpha
Helix 14
14
A
279 283Right-handed 310
Helix 15
15
A
295 304Right-handed alpha
Helix 16
16
A
311 329Right-handed alpha
Helix 17
17
A
336 343Right-handed alpha
Helix 18
18
A
373 388Right-handed alpha
Helix 19
19
A
390 405Right-handed alpha
Helix 20
20
B
37 45Right-handed alpha
Helix 21
21
B
51 72Right-handed alpha
Helix 22
22
B
75 90Right-handed alpha
Helix 23
23
B
91 94Right-handed 310
Helix 24
24
B
108 112Right-handed 310
Helix 25
25
B
136 141Right-handed 310
Helix 26
26
B
149 162Right-handed alpha
Helix 27
27
B
167 178Right-handed alpha
Helix 28
28
B
180 185Right-handed alpha
Helix 29
29
B
188 197Right-handed alpha
Helix 30
30
B
224 232Right-handed alpha
Helix 31
31
B
234 247Right-handed alpha
Helix 32
32
B
252 267Right-handed alpha
Helix 33
33
B
279 283Right-handed 310
Helix 34
34
B
295 304Right-handed alpha
Helix 35
35
B
311 329Right-handed alpha
Helix 36
36
B
336 341Right-handed alpha
Helix 37
37
B
373 388Right-handed alpha
Helix 38
38
B
390 405Right-handed alpha
Helix 39
39
C
37 45Right-handed alpha
Helix 40
40
C
51 72Right-handed alpha
Helix 41
41
C
75 90Right-handed alpha
Helix 42
42
C
91 94Right-handed 310
Helix 43
43
C
108 112Right-handed 310
Helix 44
44
C
136 141Right-handed 310
Helix 45
45
C
149 162Right-handed alpha
Helix 46
46
C
167 178Right-handed alpha
Helix 47
47
C
180 185Right-handed alpha
Helix 48
48
C
188 197Right-handed alpha
Helix 49
49
C
224 232Right-handed alpha
Helix 50
50
C
234 247Right-handed alpha
Helix 51
51
C
252 267Right-handed alpha
Helix 52
52
C
279 283Right-handed 310
Helix 53
53
C
295 304Right-handed alpha
Helix 54
54
C
311 329Right-handed alpha
Helix 55
55
C
336 343Right-handed alpha
Helix 56
56
C
373 388Right-handed alpha
Helix 57
57
C
390 405Right-handed alpha
Helix 58
58
D
37 45Right-handed alpha
Helix 59
59
D
51 72Right-handed alpha
Helix 60
60
D
75 90Right-handed alpha
Helix 61
61
D
91 94Right-handed 310
Helix 62
62
D
108 112Right-handed 310
Helix 63
63
D
136 141Right-handed 310
Helix 64
64
D
149 162Right-handed alpha
Helix 65
65
D
167 178Right-handed alpha
Helix 66
66
D
180 185Right-handed alpha
Helix 67
67
D
188 195Right-handed alpha
Helix 68
68
D
224 232Right-handed alpha
Helix 69
69
D
234 247Right-handed alpha
Helix 70
70
D
252 267Right-handed alpha
Helix 71
71
D
279 283Right-handed 310
Helix 72
72
D
295 304Right-handed alpha
Helix 73
73
D
311 329Right-handed alpha
Helix 74
74
D
336 343Right-handed alpha
Helix 75
75
D
373 388Right-handed alpha
Helix 76
76
D
390 405Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4E0T. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 121first strand
Strand 2
A
126 132anti-parallel
Strand 3
A
205 211anti-parallel
Strand 4
A
217 222anti-parallel
Strand 5
A
271 276anti-parallel
Strand 6
A
285 291anti-parallel
Strand 7
A
348 354anti-parallel
Strand 8
A
362 368anti-parallel
Strand 9
A
417 425anti-parallel
Strand 10
A
429 436anti-parallel
Strand 11
A
115 121anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 121first strand
Strand 2
B
127 132anti-parallel
Strand 3
B
205 211anti-parallel
Strand 4
B
217 222anti-parallel
Strand 5
B
271 276anti-parallel
Strand 6
B
285 291anti-parallel
Strand 7
B
348 354anti-parallel
Strand 8
B
362 368anti-parallel
Strand 9
B
417 425anti-parallel
Strand 10
B
429 436anti-parallel
Strand 11
B
115 121anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
115 121first strand
Strand 2
C
127 132anti-parallel
Strand 3
C
205 211anti-parallel
Strand 4
C
217 222anti-parallel
Strand 5
C
271 276anti-parallel
Strand 6
C
285 291anti-parallel
Strand 7
C
348 354anti-parallel
Strand 8
C
362 368anti-parallel
Strand 9
C
417 425anti-parallel
Strand 10
C
429 436anti-parallel
Strand 11
C
115 121anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
115 121first strand
Strand 2
D
127 132anti-parallel
Strand 3
D
205 211anti-parallel
Strand 4
D
217 222anti-parallel
Strand 5
D
271 276anti-parallel
Strand 6
D
285 291anti-parallel
Strand 7
D
348 354anti-parallel
Strand 8
D
362 368anti-parallel
Strand 9
D
417 425anti-parallel
Strand 10
D
429 436anti-parallel
Strand 11
D
115 121anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il