Analysis of interatomic Contacts of Structural Units in PDB entry:
4E16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E16 entry

There is 1 chain in PDB entry 4E16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4E16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 17Right-handed 310
Helix 2
2
A
18 28Right-handed alpha
Helix 3
3
A
39 46Right-handed 310
Helix 4
4
A
56 58Right-handed 310
Helix 5
5
A
59 73Right-handed alpha
Helix 6
6
A
90 102Right-handed alpha
Helix 7
7
A
112 122Right-handed alpha
Helix 8
8
A
146 149Right-handed 310
Helix 9
9
A
150 156Right-handed alpha
Helix 10
10
A
169 180Right-handed alpha
Helix 11
11
A
208 216Right-handed alpha
Helix 12
12
A
228 232Right-handed 310
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There are 2 sheets in PDB entry 4E16. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
30 33parallel
Strand 3
A
77 81parallel
Strand 4
A
4 8parallel
Strand 5
A
105 108parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 138first strand
Strand 2
A
160 165parallel
Strand 3
A
222 226anti-parallel
Strand 4
A
187 192anti-parallel
Strand 5
A
200 205anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il