Analysis of interatomic Contacts of Structural Units in PDB entry:
4E1Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E1Z entry

There is 1 chain in PDB entry 4E1Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 883GLN 1173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4E1Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
889 891Right-handed 310
Helix 2
2
A
933 950Right-handed alpha
Helix 3
3
A
982 986Right-handed alpha
Helix 4
4
A
987 989Right-handed 310
Helix 5
5
A
992 1013Right-handed alpha
Helix 6
6
A
1021 1023Right-handed 310
Helix 7
7
A
1029 1031Right-handed 310
Helix 8
8
A
1060 1064Right-handed 310
Helix 9
9
A
1065 1071Right-handed alpha
Helix 10
10
A
1076 1092Right-handed alpha
Helix 11
11
A
1099 1109Right-handed alpha
Helix 12
12
A
1112 1127Right-handed alpha
Helix 13
13
A
1137 1148Right-handed alpha
Helix 14
14
A
1151 1155Right-handed 310
Helix 15
15
A
1157 1172Right-handed alpha
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There are 4 sheets in PDB entry 4E1Z. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
893 901first strand
Strand 2
A
905 912anti-parallel
Strand 3
A
921 928anti-parallel
Strand 4
A
970 975anti-parallel
Strand 5
A
958 963anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
980 981first strand
Strand 2
A
1025 1027anti-parallel
Strand 3
A
1033 1035anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1015 1016first strand
Strand 2
A
1042 1043anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1050 1052first strand
Strand 2
A
1073 1075anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il