Analysis of interatomic Contacts of Structural Units in PDB entry:
4E36


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E36 entry

There are 2 chains in PDB entry 4E36 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 54ARG 961
B
 VAL 55ARG 961
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 72 helices in PDB entry 4E36. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
143 145Right-handed 310
Helix 2
2
A
203 207Right-handed 310
Helix 3
3
A
260 264Right-handed 310
Helix 4
4
A
289 293Right-handed 310
Helix 5
5
A
295 315Right-handed alpha
Helix 6
6
A
346 350Right-handed alpha
Helix 7
7
A
357 375Right-handed alpha
Helix 8
8
A
385 388Right-handed 310
Helix 9
9
A
389 408Right-handed alpha
Helix 10
10
A
412 429Right-handed alpha
Helix 11
11
A
442 449Right-handed alpha
Helix 12
12
A
451 470Right-handed alpha
Helix 13
13
A
470 484Right-handed alpha
Helix 14
14
A
491 501Right-handed alpha
Helix 15
15
A
533 544Right-handed alpha
Helix 16
16
A
625 628Right-handed 310
Helix 17
17
A
638 649Right-handed alpha
Helix 18
18
A
650 654Right-handed 310
Helix 19
19
A
655 673Right-handed alpha
Helix 20
20
A
676 684Right-handed alpha
Helix 21
21
A
685 689Right-handed 310
Helix 22
22
A
692 713Right-handed alpha
Helix 23
23
A
715 729Right-handed alpha
Helix 24
24
A
730 735Right-handed alpha
Helix 25
25
A
744 761Right-handed alpha
Helix 26
26
A
763 780Right-handed alpha
Helix 27
27
A
787 799Right-handed alpha
Helix 28
28
A
801 815Right-handed alpha
Helix 29
29
A
817 829Right-handed alpha
Helix 30
30
A
833 847Right-handed alpha
Helix 31
31
A
851 853Right-handed 310
Helix 32
32
A
854 865Right-handed alpha
Helix 33
33
A
867 887Right-handed alpha
Helix 34
34
A
891 901Right-handed alpha
Helix 35
35
A
907 921Right-handed alpha
Helix 36
36
A
928 961Right-handed alpha
Helix 37
37
B
143 145Right-handed 310
Helix 38
38
B
203 207Right-handed 310
Helix 39
39
B
260 264Right-handed 310
Helix 40
40
B
289 293Right-handed 310
Helix 41
41
B
295 315Right-handed alpha
Helix 42
42
B
346 350Right-handed alpha
Helix 43
43
B
357 375Right-handed alpha
Helix 44
44
B
385 388Right-handed 310
Helix 45
45
B
389 408Right-handed alpha
Helix 46
46
B
412 429Right-handed alpha
Helix 47
47
B
442 449Right-handed alpha
Helix 48
48
B
451 470Right-handed alpha
Helix 49
49
B
470 484Right-handed alpha
Helix 50
50
B
491 501Right-handed alpha
Helix 51
51
B
534 544Right-handed alpha
Helix 52
52
B
625 628Right-handed 310
Helix 53
53
B
638 649Right-handed alpha
Helix 54
54
B
650 654Right-handed 310
Helix 55
55
B
655 673Right-handed alpha
Helix 56
56
B
676 684Right-handed alpha
Helix 57
57
B
685 689Right-handed 310
Helix 58
58
B
692 713Right-handed alpha
Helix 59
59
B
715 729Right-handed alpha
Helix 60
60
B
730 735Right-handed alpha
Helix 61
61
B
744 761Right-handed alpha
Helix 62
62
B
763 780Right-handed alpha
Helix 63
63
B
787 799Right-handed alpha
Helix 64
64
B
801 815Right-handed alpha
Helix 65
65
B
817 829Right-handed alpha
Helix 66
66
B
833 847Right-handed alpha
Helix 67
67
B
851 853Right-handed 310
Helix 68
68
B
854 865Right-handed alpha
Helix 69
69
B
867 887Right-handed alpha
Helix 70
70
B
891 901Right-handed alpha
Helix 71
71
B
907 921Right-handed alpha
Helix 72
72
B
928 961Right-handed alpha
Back to top of page

There are 16 sheets in PDB entry 4E36. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
116 123anti-parallel
Strand 3
A
163 171anti-parallel
Strand 4
A
90 98anti-parallel
Strand 5
A
77 85anti-parallel
Strand 6
A
219 226parallel
Strand 7
A
249 253anti-parallel
Strand 8
A
238 243anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 111first strand
Strand 2
A
147 151anti-parallel
Strand 3
A
138 142anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 185first strand
Strand 2
A
191 198anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 234first strand
Strand 2
A
266 269anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 277first strand
Strand 2
A
283 288anti-parallel
Strand 3
A
322 328parallel
Strand 4
A
341 345parallel
Strand 5
A
335 336anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 383first strand
Strand 2
A
488 490parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 613first strand
Strand 2
A
558 566anti-parallel
Strand 3
A
547 555anti-parallel
Strand 4
A
635 636parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 603first strand
Strand 2
A
590 594anti-parallel
Strand 3
A
621 623anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 136first strand
Strand 2
B
116 123anti-parallel
Strand 3
B
163 171anti-parallel
Strand 4
B
90 98anti-parallel
Strand 5
B
77 85anti-parallel
Strand 6
B
219 226parallel
Strand 7
B
249 253anti-parallel
Strand 8
B
238 243anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 111first strand
Strand 2
B
147 151anti-parallel
Strand 3
B
138 142anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 185first strand
Strand 2
B
191 198anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 234first strand
Strand 2
B
266 269anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 277first strand
Strand 2
B
283 288anti-parallel
Strand 3
B
322 328parallel
Strand 4
B
341 345parallel
Strand 5
B
335 336anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
381 383first strand
Strand 2
B
488 490parallel
Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
609 613first strand
Strand 2
B
558 566anti-parallel
Strand 3
B
547 555anti-parallel
Strand 4
B
635 636parallel
Back to list of sheets
Back to top of page

There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
601 603first strand
Strand 2
B
590 594anti-parallel
Strand 3
B
621 623anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il