Analysis of interatomic Contacts of Structural Units in PDB entry:
4E47

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4E47 entry

There are 4 chains in PDB entry 4E47 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 116	HIS 368
B	HIS 116	HIS 369
C	GLY 117	HIS 369
D	HIS 116	HIS 369

There are 20 helices in PDB entry 4E47. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	209	214	Right-handed alpha
Helix 2	2	A	252	258	Right-handed alpha
Helix 3	3	A	259	263	Right-handed 310
Helix 4	4	A	291	295	Right-handed 310
Helix 5	5	A	350	364	Right-handed alpha
Helix 6	6	B	209	215	Right-handed alpha
Helix 7	7	B	251	258	Right-handed alpha
Helix 8	8	B	259	263	Right-handed 310
Helix 9	9	B	291	295	Right-handed 310
Helix 10	10	B	350	364	Right-handed alpha
Helix 11	11	C	209	215	Right-handed alpha
Helix 12	12	C	251	257	Right-handed alpha
Helix 13	13	C	259	263	Right-handed 310
Helix 14	14	C	291	295	Right-handed 310
Helix 15	15	C	350	364	Right-handed alpha
Helix 16	16	D	209	215	Right-handed alpha
Helix 17	17	D	251	257	Right-handed alpha
Helix 18	18	D	259	263	Right-handed 310
Helix 19	19	D	291	295	Right-handed 310
Helix 20	20	D	350	364	Right-handed alpha

There are 20 sheets in PDB entry 4E47. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	122	first strand
Strand 2	A	128	131	anti-parallel
Strand 3	A	141	147	anti-parallel
Strand 4	A	153	160	anti-parallel
Strand 5	A	163	176	anti-parallel
Strand 6	A	179	184	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	122	first strand
Strand 2	A	128	131	anti-parallel
Strand 3	A	141	147	anti-parallel
Strand 4	A	153	160	anti-parallel
Strand 5	A	163	176	anti-parallel
Strand 6	A	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	216	220	first strand
Strand 2	A	228	232	anti-parallel
Strand 3	A	330	333	anti-parallel
Strand 4	A	296	297	parallel

Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	245	first strand
Strand 2	A	314	321	anti-parallel
Strand 3	A	303	310	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	251	first strand
Strand 2	A	273	276	anti-parallel
Strand 3	A	267	268	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	122	first strand
Strand 2	B	128	132	anti-parallel
Strand 3	B	141	147	anti-parallel
Strand 4	B	153	160	anti-parallel
Strand 5	B	163	176	anti-parallel
Strand 6	B	179	184	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	122	first strand
Strand 2	B	128	132	anti-parallel
Strand 3	B	141	147	anti-parallel
Strand 4	B	153	160	anti-parallel
Strand 5	B	163	176	anti-parallel
Strand 6	B	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	216	220	first strand
Strand 2	B	228	232	anti-parallel
Strand 3	B	330	333	anti-parallel
Strand 4	B	296	297	parallel

Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	245	first strand
Strand 2	B	314	321	anti-parallel
Strand 3	B	303	310	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	250	first strand
Strand 2	B	274	276	anti-parallel
Strand 3	B	267	268	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	122	first strand
Strand 2	C	128	132	anti-parallel
Strand 3	C	141	147	anti-parallel
Strand 4	C	153	160	anti-parallel
Strand 5	C	163	176	anti-parallel
Strand 6	C	179	184	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	122	first strand
Strand 2	C	128	132	anti-parallel
Strand 3	C	141	147	anti-parallel
Strand 4	C	153	160	anti-parallel
Strand 5	C	163	176	anti-parallel
Strand 6	C	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	216	220	first strand
Strand 2	C	228	232	anti-parallel
Strand 3	C	330	333	anti-parallel
Strand 4	C	296	297	parallel

Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	245	first strand
Strand 2	C	314	321	anti-parallel
Strand 3	C	303	310	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	250	first strand
Strand 2	C	274	276	anti-parallel
Strand 3	C	267	268	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	118	122	first strand
Strand 2	D	128	132	anti-parallel
Strand 3	D	141	147	anti-parallel
Strand 4	D	153	160	anti-parallel
Strand 5	D	163	176	anti-parallel
Strand 6	D	179	184	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	118	122	first strand
Strand 2	D	128	132	anti-parallel
Strand 3	D	141	147	anti-parallel
Strand 4	D	153	160	anti-parallel
Strand 5	D	163	176	anti-parallel
Strand 6	D	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	216	220	first strand
Strand 2	D	228	232	anti-parallel
Strand 3	D	330	333	anti-parallel
Strand 4	D	296	297	parallel

Back to list of sheets
Back to top of page

There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	241	245	first strand
Strand 2	D	314	321	anti-parallel
Strand 3	D	303	310	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	248	250	first strand
Strand 2	D	274	276	anti-parallel
Strand 3	D	267	268	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4E47

Analysis of interatomic Contacts of Structural Units in PDB entry:
4E47