Analysis of interatomic Contacts of Structural Units in PDB entry:
4E6K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E6K entry

There are 9 chains in PDB entry 4E6K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 157
B
 MET 1ASP 157
C
 MET 1ASP 157
D
 MET 1GLU 156
E
 MET 1GLU 156
F
 MET 1ASP 157
G
 MET 1GLN 57
H
 MET 1GLU 51
I
 MET 1LEU 56
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4E6K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 36Right-handed alpha
Helix 2
2
A
37 65Right-handed alpha
Helix 3
3
A
82 111Right-handed alpha
Helix 4
4
A
113 145Right-handed alpha
Helix 5
5
A
145 152Right-handed alpha
Helix 6
6
B
4 35Right-handed alpha
Helix 7
7
B
37 65Right-handed alpha
Helix 8
8
B
82 111Right-handed alpha
Helix 9
9
B
113 145Right-handed alpha
Helix 10
10
B
145 152Right-handed alpha
Helix 11
11
C
4 35Right-handed alpha
Helix 12
12
C
37 65Right-handed alpha
Helix 13
13
C
82 111Right-handed alpha
Helix 14
14
C
113 145Right-handed alpha
Helix 15
15
C
145 152Right-handed alpha
Helix 16
16
D
4 35Right-handed alpha
Helix 17
17
D
37 65Right-handed alpha
Helix 18
18
D
82 111Right-handed alpha
Helix 19
19
D
113 145Right-handed alpha
Helix 20
20
D
145 152Right-handed alpha
Helix 21
21
E
4 36Right-handed alpha
Helix 22
22
E
37 65Right-handed alpha
Helix 23
23
E
82 112Right-handed alpha
Helix 24
24
E
113 145Right-handed alpha
Helix 25
25
E
145 152Right-handed alpha
Helix 26
26
F
4 35Right-handed alpha
Helix 27
27
F
37 65Right-handed alpha
Helix 28
28
F
82 111Right-handed alpha
Helix 29
29
F
113 145Right-handed alpha
Helix 30
30
F
145 152Right-handed alpha
Helix 31
31
G
11 20Right-handed alpha
Helix 32
32
G
24 33Right-handed alpha
Helix 33
33
G
41 56Right-handed alpha
Helix 34
34
H
11 15Right-handed alpha
Helix 35
35
H
41 50Right-handed alpha
Helix 36
36
I
11 20Right-handed alpha
Helix 37
37
I
24 33Right-handed alpha
Helix 38
38
I
41 56Right-handed alpha
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There are 3 sheets in PDB entry 4E6K. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 4first strand
Strand 2
G
9 10anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
2 4first strand
Strand 2
H
9 10anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
2 4first strand
Strand 2
I
9 10anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il