Analysis of interatomic Contacts of Structural Units in PDB entry:
4E6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E6T entry

There are 3 chains in PDB entry 4E6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -6ARG 262
B
 THR -9ARG 262
C
 ASP 5ARG 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4E6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
197 204Right-handed alpha
Helix 2
2
A
207 223Right-handed alpha
Helix 3
3
A
227 239Right-handed alpha
Helix 4
4
A
243 245Right-handed 310
Helix 5
5
A
246 256Right-handed alpha
Helix 6
6
B
197 204Right-handed alpha
Helix 7
7
B
207 223Right-handed alpha
Helix 8
8
B
227 239Right-handed alpha
Helix 9
9
B
243 245Right-handed 310
Helix 10
10
B
246 256Right-handed alpha
Helix 11
11
C
197 204Right-handed alpha
Helix 12
12
C
207 223Right-handed alpha
Helix 13
13
C
227 239Right-handed alpha
Helix 14
14
C
243 245Right-handed 310
Helix 15
15
C
246 256Right-handed alpha
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There are 9 sheets in PDB entry 4E6T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
30 31parallel
Strand 3
A
48 49parallel
Strand 4
A
66 69parallel
Strand 5
A
96 98parallel
Strand 6
A
121 122parallel
Strand 7
A
139 140parallel
Strand 8
A
157 158parallel
Strand 9
A
175 176parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
35 37parallel
Strand 3
A
53 55parallel
Strand 4
A
82 85parallel
Strand 5
A
107 110parallel
Strand 6
A
127 128parallel
Strand 7
A
145 146parallel
Strand 8
A
163 164parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
42 43parallel
Strand 3
A
60 61parallel
Strand 4
A
90 91parallel
Strand 5
A
115 116parallel
Strand 6
A
133 134parallel
Strand 7
A
151 152parallel
Strand 8
A
169 170parallel
Strand 9
A
184 187parallel
Strand 10
A
192 196anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 13first strand
Strand 2
B
30 31parallel
Strand 3
B
48 49parallel
Strand 4
B
66 69parallel
Strand 5
B
96 98parallel
Strand 6
B
121 122parallel
Strand 7
B
139 140parallel
Strand 8
B
157 158parallel
Strand 9
B
175 176parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 19first strand
Strand 2
B
35 37parallel
Strand 3
B
53 55parallel
Strand 4
B
82 85parallel
Strand 5
B
107 110parallel
Strand 6
B
127 128parallel
Strand 7
B
145 146parallel
Strand 8
B
163 164parallel
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There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 25first strand
Strand 2
B
42 43parallel
Strand 3
B
60 61parallel
Strand 4
B
90 91parallel
Strand 5
B
115 116parallel
Strand 6
B
133 134parallel
Strand 7
B
151 152parallel
Strand 8
B
169 170parallel
Strand 9
B
184 187parallel
Strand 10
B
192 196anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 13first strand
Strand 2
C
30 31parallel
Strand 3
C
48 49parallel
Strand 4
C
66 69parallel
Strand 5
C
96 98parallel
Strand 6
C
121 122parallel
Strand 7
C
139 140parallel
Strand 8
C
157 158parallel
Strand 9
C
175 176parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 19first strand
Strand 2
C
35 37parallel
Strand 3
C
53 55parallel
Strand 4
C
82 85parallel
Strand 5
C
107 110parallel
Strand 6
C
127 128parallel
Strand 7
C
145 146parallel
Strand 8
C
163 164parallel
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There are 10 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 25first strand
Strand 2
C
42 43parallel
Strand 3
C
60 61parallel
Strand 4
C
90 91parallel
Strand 5
C
115 116parallel
Strand 6
C
133 134parallel
Strand 7
C
151 152parallel
Strand 8
C
169 170parallel
Strand 9
C
184 187parallel
Strand 10
C
192 196anti-parallel
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