Analysis of interatomic Contacts of Structural Units in PDB entry:
4E6X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E6X entry

There are 3 chains in PDB entry 4E6X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 41ALA 376
B
 GLU 41TYR 375
C
 GLU 41TYR 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 4E6X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 55Right-handed alpha
Helix 2
2
A
94 96Right-handed 310
Helix 3
3
A
97 111Right-handed alpha
Helix 4
4
A
119 123Right-handed 310
Helix 5
5
A
139 145Right-handed alpha
Helix 6
6
A
189 203Right-handed alpha
Helix 7
7
A
205 214Right-handed alpha
Helix 8
8
A
214 219Right-handed alpha
Helix 9
9
A
257 262Right-handed alpha
Helix 10
10
A
266 279Right-handed alpha
Helix 11
11
A
280 283Right-handed 310
Helix 12
12
A
284 295Right-handed alpha
Helix 13
13
A
358 373Right-handed alpha
Helix 14
14
B
42 55Right-handed alpha
Helix 15
15
B
94 96Right-handed 310
Helix 16
16
B
97 111Right-handed alpha
Helix 17
17
B
119 123Right-handed 310
Helix 18
18
B
139 145Right-handed alpha
Helix 19
19
B
189 203Right-handed alpha
Helix 20
20
B
205 214Right-handed alpha
Helix 21
21
B
214 219Right-handed alpha
Helix 22
22
B
258 262Right-handed alpha
Helix 23
23
B
266 279Right-handed alpha
Helix 24
24
B
280 283Right-handed 310
Helix 25
25
B
284 295Right-handed alpha
Helix 26
26
B
342 345Right-handed 310
Helix 27
27
B
356 361Right-handed alpha
Helix 28
28
B
361 373Right-handed alpha
Helix 29
29
C
42 55Right-handed alpha
Helix 30
30
C
94 96Right-handed 310
Helix 31
31
C
97 111Right-handed alpha
Helix 32
32
C
119 123Right-handed 310
Helix 33
33
C
139 145Right-handed alpha
Helix 34
34
C
188 203Right-handed alpha
Helix 35
35
C
205 214Right-handed alpha
Helix 36
36
C
214 219Right-handed alpha
Helix 37
37
C
257 262Right-handed alpha
Helix 38
38
C
266 279Right-handed alpha
Helix 39
39
C
284 295Right-handed alpha
Helix 40
40
C
342 345Right-handed 310
Helix 41
41
C
358 373Right-handed alpha
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There are 8 sheets in PDB entry 4E6X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
68 78anti-parallel
Strand 3
A
58 65anti-parallel
Strand 4
A
346 352anti-parallel
Strand 5
A
335 341anti-parallel
Strand 6
A
324 330anti-parallel
Strand 7
A
315 318anti-parallel
Strand 8
A
310 312anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
263 265anti-parallel
Strand 3
A
224 225anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 135first strand
Strand 2
A
129 131anti-parallel
Strand 3
A
174 175parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
B
68 78anti-parallel
Strand 3
B
58 65anti-parallel
Strand 4
B
346 352anti-parallel
Strand 5
B
335 341anti-parallel
Strand 6
B
324 330anti-parallel
Strand 7
B
315 318anti-parallel
Strand 8
B
310 312anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 92first strand
Strand 2
B
263 265anti-parallel
Strand 3
B
224 225anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
83 84first strand
Strand 2
C
68 78anti-parallel
Strand 3
C
58 65anti-parallel
Strand 4
C
346 352anti-parallel
Strand 5
C
334 341anti-parallel
Strand 6
C
324 331anti-parallel
Strand 7
C
315 318anti-parallel
Strand 8
C
310 312anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
91 92first strand
Strand 2
C
263 265anti-parallel
Strand 3
C
224 225anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
130 131first strand
Strand 2
C
134 135anti-parallel
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