Analysis of interatomic Contacts of Structural Units in PDB entry:
4E8H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E8H entry

There are 4 chains in PDB entry 4E8H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0LEU 215
B
 HIS 0LEU 215
C
 HIS 0LEU 215
D
 HIS 0LEU 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 4E8H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
37 41Right-handed 310
Helix 3
3
A
45 52Right-handed alpha
Helix 4
4
A
69 82Right-handed alpha
Helix 5
5
A
91 108Right-handed alpha
Helix 6
6
A
108 122Right-handed alpha
Helix 7
7
A
128 146Right-handed alpha
Helix 8
8
A
158 174Right-handed alpha
Helix 9
9
A
181 196Right-handed alpha
Helix 10
10
A
199 213Right-handed alpha
Helix 11
11
B
14 27Right-handed alpha
Helix 12
12
B
45 52Right-handed alpha
Helix 13
13
B
69 82Right-handed alpha
Helix 14
14
B
91 108Right-handed alpha
Helix 15
15
B
108 124Right-handed alpha
Helix 16
16
B
128 146Right-handed alpha
Helix 17
17
B
158 174Right-handed alpha
Helix 18
18
B
181 196Right-handed alpha
Helix 19
19
B
199 213Right-handed alpha
Helix 20
20
C
14 27Right-handed alpha
Helix 21
21
C
37 41Right-handed 310
Helix 22
22
C
45 52Right-handed alpha
Helix 23
23
C
69 82Right-handed alpha
Helix 24
24
C
91 108Right-handed alpha
Helix 25
25
C
108 122Right-handed alpha
Helix 26
26
C
128 146Right-handed alpha
Helix 27
27
C
158 174Right-handed alpha
Helix 28
28
C
181 196Right-handed alpha
Helix 29
29
C
199 213Right-handed alpha
Helix 30
30
D
14 27Right-handed alpha
Helix 31
31
D
37 41Right-handed 310
Helix 32
32
D
45 52Right-handed alpha
Helix 33
33
D
69 82Right-handed alpha
Helix 34
34
D
91 108Right-handed alpha
Helix 35
35
D
108 122Right-handed alpha
Helix 36
36
D
128 146Right-handed alpha
Helix 37
37
D
158 174Right-handed alpha
Helix 38
38
D
181 196Right-handed alpha
Helix 39
39
D
199 213Right-handed alpha
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There are 4 sheets in PDB entry 4E8H. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 35first strand
Strand 2
A
7 10parallel
Strand 3
A
59 62anti-parallel
Strand 4
A
65 68anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 35first strand
Strand 2
B
6 10parallel
Strand 3
B
59 62anti-parallel
Strand 4
B
65 68anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 35first strand
Strand 2
C
7 10parallel
Strand 3
C
59 62anti-parallel
Strand 4
C
65 68anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
31 35first strand
Strand 2
D
6 10parallel
Strand 3
D
59 62anti-parallel
Strand 4
D
65 68anti-parallel
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